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Detailed information on CNT30493761


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SJQ9|ALFC6_ARATH, E-value = 7e-29

BLAST vs NONCODE:
NONPOPT000956, E-value = 6e-20

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671170Olea europaeaSetaria viridis29.5927.3483.5479forward
CNT30513666Olea europaeaJuglans regia34.4617.985.8792forward
CNT30615958Olea europaeaSesamum indicum48.3125.9686.05129forward
CNT30636619Olea europaeaCapsicum annuum35.5812.288.4295forward
CNT30568685Olea europaeaActinidia chinensis41.579.987.39111forward
CNT3085859Olea europaeaVigna radiata20.9711.6991.0756forward
CNT3074945Olea europaeaBrassica juncea40.8211.7583.49109forward
CNT30609114Olea europaeaGossypium raimondii40.0716.5185.05107forward
CNT30649836Olea europaeaRosa chinensis35.218.3885.1194forward
CNT30717283Olea europaeaMalus domestica golden30.3412.0986.4281forward
CNT30625244Olea europaeaDaucus carota33.7113.6888.8990forward
CNT30622084Olea europaeaCajanus cajan35.2112.6582.9894forward
CNT30154837Olea europaeaPrunus persica43.4512.5884.48116forward
CNT30571536Olea europaeaVitis vinifera21.7211.5887.9358forward
CNT30643281Olea europaeaCannabis sativa22.8515.7688.5261forward
CNT3026774Olea europaeaPopulus trichocarpa43.0713.8783.48115forward
CNT30120586Olea europaeaCitrus clementina28.8423.0590.9177forward
CNT3036222Olea europaeaCucumis melo36.726.7888.7898forward
CNT30113854Olea europaeaFicus carica61.4223.1382.32164forward

Expression of CNT30493761

Peptides detected in this lncRNA

>peptide 1 (39 aa)
DHGFLVFSLFIALRLRVASSSLCPPDKNTTAGTAAGIVR*

>peptide 2 (65 aa)
GPWLLGLQFVHRVKITCSLLFALPTRQKHHSRNCSRHCALKGTNCVLGNDLWCNLGFNKVPSRRT*

Sequence

>CNT30493761
GGGACCATGGCTTCTTGGTCTTCAGTTTGTTCATCGCGTTAAGATTACGTGTAGCCTCCTCTTCGCTCTGCCCACCAGACAAAAACACCACAGCAGGAAC
TGCAGCAGGCATTGTGCGTTGAAGGGCACAAACTGTGTGCTCGGCAATGACCTCTGGTGCAACCTTGGCTTCAACAAAGTTCCCTCAAGGAGGACGTGAT
GATCATTAAGTGCCTTGTAGCAAGCAGCAAGAACACGTTCAGTCACGTCAGCACACTTGTTGATATC