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Detailed information on CNT3061869


BLAST search results

BLAST vs Swiss-Prot:
sp|O65581|ALFC5_ARATH, E-value = 2e-86

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641283Arabidopsis lyrataNymphaea colorata25.377.9680.13156forward
CNT30717283Arabidopsis lyrataMalus domestica golden28.6226.2781.25176forward
CNT30154837Arabidopsis lyrataPrunus persica22.9315.2982.27141forward

Expression of CNT3061869

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MVVVQGLVHGSKNCLRHRRTFLDVMAPVGQYLWLDDRDQSVLLADDGIAG*

Sequence

>CNT3061869
CACGAAACATTTGACATATACTCAAACCGTATAAAAGGTGACACCCGTATTAAACGCTCCTAATACTTGTATCCTTTCACATACAAGCTCTCAGAGTGCC
TTCGAGGAGGACATGGTGGTCGTTCAAGGCCTTGTACACGGCAGCAAGAACTGTCTCCGTCACCGCCGCACATTTCTTGATGTCATGGCTCCCGTCGGTC
AGTACCTCTGGCTCGACGATCGGGACCAGTCCGTTCTCCTGGCAGATGATGGCATAGCGGGCTAGCCCCTTGGCGTTCTCTTGGATAGAGAGCTCGCTTG
GCTCGGTGGCCCCAATCTTGAGGACTGCACGCCATTTTGCAAACCGGGCTCCTGCCTTGTAATACTCCTGGCAACGTGCACCAAGCGAATCTAGACCCTG
AGTAGTGGTCTCGCCGTTGGTCCCTGCTAGATCAACCACACCCTTGTCCACTTTGATTCCAGGGATAACTCCGTTCTCCTGATACCAAAAAAAGAATCAG
AATTCAAATTGAAACCGTAAGTTCCATTTGAGTCATATCAAGAGCTCCACTTCTGCAACACTTGAACACCAATGATTAAGACTAGAGCTGGAGTTTGGTT
TTTCAGGGACGGACC