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Detailed information on CNT30615958


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SJQ9|ALFC6_ARATH, E-value = 1e-91

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690595Sesamum indicumOryza sativa25.1513.9584125forward
CNT30671170Sesamum indicumSetaria viridis20.3234.9583.17101forward
CNT30522989Sesamum indicumSetaria italica28.1715.0781.43140forward
CNT30513666Sesamum indicumJuglans regia43.6642.2284.33217forward
CNT30282161Sesamum indicumChenopodium quinoa33.629.8784.43167forward
CNT3021292Sesamum indicumCitrullus lanatus23.7417.5683.9118forward
CNT30493761Sesamum indicumOlea europaea25.9648.3186.05129forward
CNT30636709Sesamum indicumCapsicum annuum37.8331.7685.64188forward
CNT30222685Sesamum indicumHordeum vulgare27.3646.2684.56136forward
CNT30564033Sesamum indicumActinidia chinensis35.4133.5283.52176forward
CNT3085829Sesamum indicumVigna radiata28.5738.0780.99142forward
CNT30552124Sesamum indicumOryza glaberrima25.1513.583.2125forward
CNT30145974Sesamum indicumMedicago truncatula17.327.0483.7286forward
CNT30457732Sesamum indicumSaccharum spontaneum25.559.5382.68127forward
CNT304578Sesamum indicumZea mays25.5523.0183.46127forward
CNT30609114Sesamum indicumGossypium raimondii34.8126.783.24173forward
CNT30649836Sesamum indicumRosa chinensis32.814.5387.73163forward
CNT30717283Sesamum indicumMalus domestica golden37.0227.4680.98184forward
CNT30625244Sesamum indicumDaucus carota36.8227.8183.61183forward
CNT30349462Sesamum indicumEragrostis tef29.9821.5381.21149forward
CNT30154837Sesamum indicumPrunus persica50.9127.4484.98253forward
CNT30433772Sesamum indicumPapaver somniferum50.717.9982.94252forward
CNT30571536Sesamum indicumVitis vinifera28.7728.5483.22143forward
CNT30643281Sesamum indicumCannabis sativa51.5166.1583.2256forward
CNT3026858Sesamum indicumPopulus trichocarpa38.4329.5781.15191forward
CNT30120586Sesamum indicumCitrus clementina14.2921.2685.9271forward
CNT3036222Sesamum indicumCucumis melo23.3431.6986.21116forward
CNT30149431Sesamum indicumBrachypodium distachyon23.7424.4883.05118forward
CNT30113854Sesamum indicumFicus carica31.9922.4384.91159forward
CNT30337374Sesamum indicumCynara cardunculus21.932.3681.65109forward
CNT30724801Sesamum indicumLupinus angustifolius52.5220.8580.46261forward

Expression of CNT30615958

Peptides detected in this lncRNA

>peptide 1 (96 aa)
AFGTFSSFPDQALRVLCWRARPNEKERLQGFLVFSLFMALRLTVASSSLCPPDKNTTAGTAAGIVRCKARTVVPSRRTWISGSTMGTKPFSWQMIA*

Sequence

>CNT30615958
GGCCTTTGGGACATTTTCCTCCTTTCCAGACCAAGCCTTGAGGGTACTCTGCTGGAGAGCACGTCCAAATGAGAAAGAAAGACTCCAAGGCTTCTTGGTC
TTTAGTTTGTTCATGGCGTTGAGGTTGACTGTGGCCTCTTCTTCACTCTGTCCACCAGACAAAAACACCACAGCAGGGACTGCAGCGGGCATTGTTCGCT
GCAAGGCACGAACTGTGGTACCCTCCAGGAGAACGTGGATCTCGGGCTCAACAATGGGTACCAAACCATTCTCCTGGCAGATGATAGCATAGCGTGCTAG
ACCGTTGGCATTTTCATTGATAGCAAGCTGTGATGGCTCATTGGGACCAATCTTAAGCACAGCTCTCCATTTAGCAAACCTAGCACCAGCAGCATAGTAT
TGTTGGCAACGCTGTGCAAGCCCGTCAAGACCTTGGGTGGTGGTCTCACCATTGGTGCCAGCAAGTTCAACAGTACCCTTGTCAACCTTAATACCAG