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Detailed information on CNT30636619


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675100Capsicum annuumSetaria viridis19.3865.6582.12151forward
CNT30513666Capsicum annuumJuglans regia26.0639.4983.74203forward
CNT30375244Capsicum annuumArabidopsis thaliana22.3433.9883.91174forward
CNT30729011Capsicum annuumCorchorus capsularis28.1132.6486.3219forward
CNT30493761Capsicum annuumOlea europaea12.235.5888.4295forward
CNT3085640Capsicum annuumVigna radiata32.4847.5681.42253forward
CNT30552330Capsicum annuumOryza glaberrima25.6727.5980.5200forward
CNT30135152Capsicum annuumLolium perenne17.220.6882.84134forward
CNT30650515Capsicum annuumRosa chinensis42.1141.7385.37328forward
CNT30717283Capsicum annuumMalus domestica golden40.3146.8780.57314forward
CNT30625244Capsicum annuumDaucus carota37.4844.3880.82292forward
CNT30479170Capsicum annuumArabidopsis halleri13.4824.8289.52105forward
CNT30364112Capsicum annuumSorghum bicolor31.0727.582.64242forward
CNT30622084Capsicum annuumCajanus cajan31.4532.9781.63245forward
CNT30154837Capsicum annuumPrunus persica40.5634.2784.49316forward
CNT30433772Capsicum annuumPapaver somniferum41.4623.0581.73323forward
CNT30643281Capsicum annuumCannabis sativa18.7437.7384.25146forward
CNT3026774Capsicum annuumPopulus trichocarpa51.648.4981.34402forward
CNT30120586Capsicum annuumCitrus clementina41.9897.985.63327forward
CNT3036222Capsicum annuumCucumis melo21.1845.0887.88165forward
CNT30724887Capsicum annuumLupinus angustifolius20.0311.7181.41156forward

Expression of CNT30636619

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MSQDQNNVPQKVLIKRKKKRKKKALPYYVH*

>peptide 2 (49 aa)
MVVIESLVASSKNALSNISTLVNVMGSINKDLGLNNGYKTVLLADNGISG

>peptide 3 (46 aa)
MVRCKARTVYSAITSGATLADSEPGVTMLGFNKVPSRRTWWSLRAL*

>peptide 4 (67 aa)
KDNVHLINQPRKLLHERCHKTKIMFLKKFLLNGKKKEKKKPYHIMSTDRHIRKTILSSHFQNRNQET*

Sequence

>CNT30636619
AAAAGATAATGTTCATTTAATAAACCAACCCCGAAAACTGTTACATGAAAGATGTCACAAGACCAAAATAATGTTCCTCAAAAAGTTCTTATTAAACGGA
AAAAAAAAAGAAAAAAAAAAGCCTTACCATATTATGTCCACTGATAGACACATTCGTAAAACCATATTGTCATCTCATTTTCAAAACAGAAATCAAGAAA
CATAAACCAAAAACTAAAACTTTGATCTAGTACTTGTAGTCCTTGACGTGAAGGCTCTCGGAAGCACCTTCACTCAAGTTGGAAGCTCCGGCATACTTTC
CGAGGGTAGCCTCGGAGTTGGCCTTGCACCTGGTAAGGAATGCAGCTTGTGCCTTCTGAACGTTCTCTTCCTTTCCGGCCCAGGCCTTGAGGGTGCTCTG
CTGAAGAGCACGTCCGAAAGAGAAGGAAAGTGACCATGGCTTCTTGGTTGACAGTGGCTTCCTCTTCACTTTGACCACCAGACAAGAACACCACAGCGGG
GACAGCAGCCGGCATGGTGCGCTGCAAGGCACGGACGGTGTACTCAGCAATCACTTCTGGTGCAACCTTGGCAGATTCAGAACCAGGAGTGACCATGTTA
GGCTTCAACAAGGTACCCTCAAGGAGGACATGGTGGTCATTGAGAGCCTTGTAGCAAGCAGCAAGAACGCGCTCAGTAACATCAGCACACTTGTTAATGT
CATGGGCTCCATCAACAAGGATCTCGGGCTCAACAATGGGTACAAGACCGTTCTGCTGGCAGATAATGGCATATCTGGC