Detailed information on CNT30650515


BLAST search results

BLAST vs Swiss-Prot:
sp|P46257|ALF2_PEA, E-value = 1e-137

BLAST vs NONCODE:
NONPOPT000956, E-value = 5e-63

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522989Rosa chinensisSetaria italica39.5733.4880.39311forward
CNT30513666Rosa chinensisJuglans regia55.9885.682.95440forward
CNT30636619Rosa chinensisCapsicum annuum41.7342.1185.37328forward
CNT30222288Rosa chinensisHordeum vulgare22.7742.3283.8179forward
CNT3085829Rosa chinensisVigna radiata27.3557.6484.65215forward
CNT30145818Rosa chinensisMedicago truncatula25.5719.882.59201forward
CNT3014640Rosa chinensisZea mays23.1651.5685.16182forward
CNT30717283Rosa chinensisMalus domestica golden55.7365.3788.13438forward
CNT30625244Rosa chinensisDaucus carota54.4565.0581.31428forward
CNT30364112Rosa chinensisSorghum bicolor31.8128.4182250forward
CNT30622084Rosa chinensisCajanus cajan39.3141.5979.61309forward
CNT30359512Rosa chinensisLactuca sativa13.2325.7485.58104forward
CNT30154837Rosa chinensisPrunus persica68.3258.2486.22537forward
CNT30433772Rosa chinensisPapaver somniferum65.6536.8381.59516forward
CNT30643281Rosa chinensisCannabis sativa34.4870.0384.5271forward
CNT30149431Rosa chinensisBrachypodium distachyon18.4530.0886.9145forward
CNT30724887Rosa chinensisLupinus angustifolius33.0819.5282.69260forward

Expression of CNT30650515

Peptides detected in this lncRNA

>peptide 1 (72 aa)
MALRLRVASSSLCPPDKNTTAGTAAGVVRCKARTVYSAITSGEAFLASDPGVTMLGFKRVPSRRTWWSLRAL*

>peptide 2 (36 aa)
MQQGRAQSHQHTCQWSGVRQQGSQAQQWVPNHSPGR*

>peptide 3 (34 aa)
PKVASELALALVRRASCAALTFSFFPDQALRVLA*

Sequence

>CNT30650515
CCCAAGGTTGCCTCTGAGTTGGCCTTGGCCCTTGTGAGGAGAGCCTCCTGTGCAGCCTTAACATTTTCTTTCTTTCCTGACCAAGCCTTGAGAGTGCTGG
CTTGAAGAGCACGGCCGAAGGAGAAGGAAAGAGTCCATGGCTTCTTTCCCTTGAGCTTGTTCATGGCGTTAAGGTTGAGAGTAGCCTCCTCCTCACTCTG
TCCACCAGACAAGAACACCACAGCAGGGACAGCTGCAGGGGTAGTGCGCTGCAAGGCACGGACGGTGTACTCAGCAATCACTTCTGGTGAAGCCTTCTTG
GCATCAGATCCGGGAGTCACCATGTTGGGCTTCAAGAGAGTTCCTTCAAGAAGGACGTGGTGGTCATTGAGAGCCTTGTAACATGCAGCAAGGACGCGCT
CAGTCACATCAGCACACTTGTCAATGGAGTGGGGTCCGTCAACAAGGATCTCAGGCTCAACAATGGGTACCAAACCATTCTCCTGGCAGATGATAGCATA
ACGAGCCAAGCCATTGGCATTCTCGTTGATTGAAAGCTGAGATGGCTCATTGGGACCAATCTTGAGCACAGCACGCCATTTGGCAAACCGGGCACCGGCT
TCATAGTACTTAGCGCAGCGGGCACCAAGGCCATCCAAACCCTGGGTTGTGGTCTCACCGTCGGTGCCTTTAAGCTCAACAATGGGTACCAAACCATTCT
CCTGGCAGATGATAGCATAACGAGCCAAGCCATTGGCATTCTCGTTGATTGAAAGCTGAGATGGCTCATTGGGACCAATCTTGAGC