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Detailed information on CNT30513666


BLAST search results

BLAST vs Swiss-Prot:
sp|O65581|ALFC5_ARATH, E-value = 2e-99

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675153Juglans regiaSetaria viridis24.927.8382.81128forward
CNT30374131Juglans regiaArabidopsis thaliana21.2121.7182.57109forward
CNT30615958Juglans regiaSesamum indicum42.2243.6684.33217forward
CNT30729011Juglans regiaCorchorus capsularis35.4127.1281.87182forward
CNT30526127Juglans regiaPhaseolus vulgaris39.4942.9281.77203forward
CNT30493761Juglans regiaOlea europaea17.934.4685.8792forward
CNT30158302Juglans regiaPistacia vera18.2921.6184.0494forward
CNT30636619Juglans regiaCapsicum annuum39.4926.0683.74203forward
CNT30222288Juglans regiaHordeum vulgare35.843.582.07184forward
CNT30564032Juglans regiaActinidia chinensis40.0855.9880.58206forward
CNT3085640Juglans regiaVigna radiata37.9436.6584.62195forward
CNT30457732Juglans regiaSaccharum spontaneum45.9117.7279.24236forward
CNT304578Juglans regiaZea mays45.9142.7579.24236forward
CNT30650515Juglans regiaRosa chinensis85.655.9882.95440forward
CNT30717283Juglans regiaMalus domestica golden89.6968.8182.43461forward
CNT30625244Juglans regiaDaucus carota63.4249.5485.28326forward
CNT30349462Juglans regiaEragrostis tef4331.9479.64221forward
CNT30622084Juglans regiaCajanus cajan39.4927.3284.73203forward
CNT30154837Juglans regiaPrunus persica97.0854.1285.97499forward
CNT30433772Juglans regiaPapaver somniferum94.3634.6279.59485forward
CNT30571536Juglans regiaVitis vinifera25.4926.1581.68131forward
CNT30643281Juglans regiaCannabis sativa62.2682.6981.88320forward
CNT3026774Juglans regiaPopulus trichocarpa91.8356.9482.63472forward
CNT30120586Juglans regiaCitrus clementina40.2761.9884.06207forward
CNT3036222Juglans regiaCucumis melo28.7940.4484.46148forward
CNT30113854Juglans regiaFicus carica50.5836.6780.38260forward
CNT30724887Juglans regiaLupinus angustifolius572282.25293forward
CNT3039557Juglans regiaMarchantia polymorpha35.4123.6479.12182forward

Expression of CNT30513666

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MGTKPFSWQMIAYRAKPLALSLMASCDASVAPILSTARHLANRAPAS*

>peptide 2 (81 aa)
MGSINQNLWLNYGDQAIFLADDSISGQTIGIIVDGQLRCLSCANLEHSTPFGKSSTSFIVLLATLCKAIKTLGGGLTIGLTC

Sequence

>CNT30513666
ATTGCATTTAGGTTGAGGGTTGCCTCCTCCTCACTCTGACCACCAGACAAGAAAACAACTGCAGGAACTGCAGGAGGCATAGTTCGCTGTAGTGCCGTAA
CAGTGTACTTAGCAATCACCTCTGGTGCAACCTTTGGTGCCTCAGATCCTGGGGTCACCATGTTGGGCTTCAACAAAGTTCCCTCAAGCAGGACATGGTG
ATCATTTAGAGCTTTGTAAACAGCAGCAAGCACGCGTTCGGTCACATCAGCACACTTCTCAATATCATGGGGTCCATCAACCAGAATCTCTGGCTCAACT
ATGGGGACCAAGCCATTTTCCTGGCAGATGATAGCATATCGGGCCAAACCATTGGCATTATCGTTGATGGCCAGCTGCGATGCCTCAGTTGCGCCAATCT
TGAGCACAGCACGCCATTTGGCAAATCGAGCACCAGCTTCATAGTACTTCTGGCAACGCTGTGCAAGGCCATCAAGACCCTGGGTGGTGGTCTCACCATT
GGGCTTACCTGCAG