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Detailed information on CNT30549907


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6GV10|METK_SOLPL, E-value = 6e-59

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672945Ipomoea trilobaSetaria viridis24.9527.4686.57134forward
CNT30515028Ipomoea trilobaJuglans regia43.9527.883.05236forward
CNT30376698Ipomoea trilobaArabidopsis thaliana36.3129.3785.13195forward
CNT30266655Ipomoea trilobaChenopodium quinoa49.5323.6784.96266forward
CNT3021108Ipomoea trilobaCitrullus lanatus47.1115.3782.61253forward
CNT30381524Ipomoea trilobaManihot esculenta43.9528.5484.75236forward
CNT30402638Ipomoea trilobaBeta vulgaris47.6719.9885.55256forward
CNT30194995Ipomoea trilobaPisum sativum51.2128.8983.64275forward
CNT30495282Ipomoea trilobaOlea europaea52.3315.9685.05281forward
CNT30711739Ipomoea trilobaGlycine max43.9519.7287.29236forward
CNT30158121Ipomoea trilobaPistacia vera28.3124.3286.84152forward
CNT30638840Ipomoea trilobaCapsicum annuum35.5722.3787.96191forward
CNT3090332Ipomoea trilobaSolanum tuberosum46.5538.4687.2250forward
CNT30190465Ipomoea trilobaSecale cereale32.2260.0784.97173forward
CNT30225130Ipomoea trilobaHordeum vulgare25.8832.9480.58139forward
CNT3086110Ipomoea trilobaVigna radiata42.2720.381.5227forward
CNT30508429Ipomoea trilobaSolanum lycopersicum21.0445.7587.61113forward
CNT30174161Ipomoea trilobaTrifolium pratense51.2134.8583.64275forward
CNT30144438Ipomoea trilobaMedicago truncatula51.2156.2483.27275forward
CNT30310308Ipomoea trilobaCamelina sativa20.4847.6287.27110forward
CNT3082721Ipomoea trilobaBrassica juncea11.5521.4590.3262forward
CNT3013982Ipomoea trilobaZea mays46.5586.2182.4250forward
CNT30212612Ipomoea trilobaHelianthus annuus28.8664.3285.81155forward
CNT30624603Ipomoea trilobaDaucus carota28.3123.0387.5152forward
CNT30349162Ipomoea trilobaEragrostis tef46.1827.2284.68248forward
CNT30367875Ipomoea trilobaSorghum bicolor31.120.1985.63167forward
CNT30571189Ipomoea trilobaVitis vinifera28.682587.01154forward
CNT3055164Ipomoea trilobaAmborella trichopoda44.3220.780.67238forward
CNT3035650Ipomoea trilobaCucumis melo42.2716.8485.02227forward
CNT30101810Ipomoea trilobaOryza rufipogon45.079.5582.23242forward
CNT30116702Ipomoea trilobaOryza nivara45.0723.5681.82242forward
CNT30174424Ipomoea trilobaVigna angularis40.0426.4584.65215forward

Expression of CNT30549907

Peptides detected in this lncRNA

>peptide 1 (49 aa)
PCGPPITKRPEGLRWKMVFSSRYFSGMTGLITCSFRSWAISSLVTVSSC*

>peptide 2 (90 aa)
PVWSTNHETPRRVEVENGLLVKILLRDDRLDNVLLQVMGNLIISNGLIMLSGDENSVDPNWNHSTILIVVLNSDLSLAIGPQPGAGRFVR*

Sequence

>CNT30549907
CCCCGTGTGGTCCACCAATCACGAAACGCCCAGAAGGGTTGAGGTGGAAAATGGTCTTCTCGTCAAGATACTTCTCAGGGATGACCGGCTTGATAACGTG
CTCCTTCAGGTCATGGGCAATCTCATCATTAGTAACGGTCTCATCATGCTGAGTGGAGATGAGAACAGTGTGGACCCTAACTGGAACCATAGCACCATTC
TCATTGTAGTACTCAACAGTGACTTGAGTCTTGCCATCGGGCCTCAACCAGGGGCAGGACGCTTTGTCAGATGACCGTGAACACCTTGGGCAATGTCGGG
GCTCTGTTGCTCAATGTAAACAAGGACCTTGCAGTTGTCCGCATCTAGACCAACATCATCAGACACAAATCCTATTTTGCGGCATGTGTCACGTACAATC
TTCTCGTAGTCTACTTTGGCCTTAGTTGTGATCTCACCGAAAACCATCACCAAGTTCGTCTTGGTGCAAGTCTCACAGGCAACCTTGCTCTCAGGGTCCT
GCTCGAGGCAGGCATCCAGAACTGCATCCGATATCTG