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Detailed information on CNT30515028


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9AT55|METK2_ELAUM, E-value = 7e-164

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672441Juglans regiaSetaria viridis20.0221.9487.65170forward
CNT30521128Juglans regiaSetaria italica32.7437.9883.09278forward
CNT30641080Juglans regiaNymphaea colorata25.3224.0281.4215forward
CNT30549907Juglans regiaIpomoea triloba27.843.9583.05236forward
CNT30698521Juglans regiaQuercus lobata34.2851.8781.79291forward
CNT30373104Juglans regiaArabidopsis thaliana28.1528.4982.43239forward
CNT30618114Juglans regiaSesamum indicum26.0348.8982.35221forward
CNT30266655Juglans regiaChenopodium quinoa35.126.5184.56298forward
CNT3021108Juglans regiaCitrullus lanatus28.1514.5282.85239forward
CNT30381524Juglans regiaManihot esculenta42.6443.7783.43362forward
CNT30402638Juglans regiaBeta vulgaris47.4731.4686.6403forward
CNT30524850Juglans regiaPhaseolus vulgaris29.5634.7682.87251forward
CNT30628634Juglans regiaVigna unguiculata46.0554.3183.38391forward
CNT30194995Juglans regiaPisum sativum34.8631.0982.43296forward
CNT30495282Juglans regiaOlea europaea35.116.9282.55298forward
CNT30711739Juglans regiaGlycine max72.251.2183.69613forward
CNT3047443Juglans regiaPrunus dulcis76.854.6585.74652forward
CNT30158121Juglans regiaPistacia vera30.1540.9683.2256forward
CNT30638840Juglans regiaCapsicum annuum23.9123.7782.76203forward
CNT3090332Juglans regiaSolanum tuberosum29.5638.6284.06251forward
CNT30188757Juglans regiaSecale cereale44.7685.7881.84380forward
CNT30294498Juglans regiaTriticum aestivum21.4422.7885.16182forward
CNT30225130Juglans regiaHordeum vulgare33.6967.7782.52286forward
CNT30389985Juglans regiaTriticum turgidum30.2725.2782.49257forward
CNT30561874Juglans regiaActinidia chinensis49.9448.0782.08424forward
CNT3086110Juglans regiaVigna radiata34.5126.2185.32293forward
CNT30508429Juglans regiaSolanum lycopersicum15.1952.2385.27129forward
CNT30172560Juglans regiaTrifolium pratense26.7433.3384.58227forward
CNT30144304Juglans regiaMedicago truncatula32.3942.7782.91275forward
CNT30441436Juglans regiaAegilops tauschii20.7334.7183.52176forward
CNT30662024Juglans regiaTriticum dicoccoides36.9861.8182.17314forward
CNT30310308Juglans regiaCamelina sativa19.327182.32164forward
CNT3082721Juglans regiaBrassica juncea12.3736.3382.86105forward
CNT30471855Juglans regiaSaccharum spontaneum34.1631.5282.41290forward
CNT3013982Juglans regiaZea mays30.9890.6983.27263forward
CNT30218287Juglans regiaKalanchoe fedtschenkoi15.6725.6384.21133forward
CNT3066706Juglans regiaLeersia perrieri15.3138.2486.92130forward
CNT30650282Juglans regiaRosa chinensis34.2824.784.88291forward
CNT30212612Juglans regiaHelianthus annuus15.4354.3681.68131forward
CNT30626924Juglans regiaDaucus carota40.6427.3682.61345forward
CNT30681758Juglans regiaTriticum urartu21.4426.6985.16182forward
CNT30349162Juglans regiaEragrostis tef30.9828.8782.51263forward
CNT30363950Juglans regiaSorghum bicolor67.3749.3579.37572forward
CNT30620812Juglans regiaCajanus cajan34.5123.5982.94293forward
CNT30597069Juglans regiaOryza meridionalis20.738.886.36176forward
CNT30432398Juglans regiaPapaver somniferum34.1623.8983.79290forward
CNT30570759Juglans regiaVitis vinifera29.2144.1384.68248forward
CNT3055164Juglans regiaAmborella trichopoda50.7737.4881.9431forward
CNT3022562Juglans regiaPopulus trichocarpa45.8224.8784.58389forward
CNT3036529Juglans regiaCucumis melo40.5280.1984.59344forward
CNT30148817Juglans regiaBrachypodium distachyon33.9224.9183.68288forward
CNT30101810Juglans regiaOryza rufipogon34.1611.4479.66290forward
CNT30116702Juglans regiaOryza nivara22.7318.7981.87193forward
CNT30174554Juglans regiaVigna angularis43.751.6785.44371forward
CNT30113329Juglans regiaFicus carica28.1522.1982.01239forward
CNT30725315Juglans regiaLupinus angustifolius36.2830.6286.04308forward

Expression of CNT30515028

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MAQWHQFRGLVGGIAKHVALVTSTNLFRTLLLNVDKDLAVVRVKTHIV*

>peptide 2 (52 aa)
MCRSYGPRSGEHQAWWQAHGSMASIQGSRRWHSQTCGPGHQHQSLQDSAAQC*

>peptide 3 (58 aa)
PEIEALLDNLEDLFVGDLSCSISVNKNRQRLRNSNGIRDLHDAPPRKSIGQRHHEGRQ*

>peptide 4 (92 aa)
MHLLASPLASVTMRAANDKTARWVKVEDGLFVKILLRNHRLDHMLFKICRNLIVGDSLIVLSRDEHGVYPNRNHGTLVIVILNSDLGFPIWP*

>peptide 5 (37 aa)
MTMLVLVQVSQATLLSGSCSRHASRTASEIWSQSLSG*

>peptide 6 (44 aa)
MTKRPDGLRWKMVFSSRYFSGITGLITCCLRSAAISSLVTVSSC*

>peptide 7 (47 aa)
MWPWSPAPISSGLCCSMLTRTLQLSASRPTSSETNPIARQVSRTIFS*

Sequence

>CNT30515028
GCCTGAAATCGAAGCTCTCCTTGACAATCTTGAGGATCTCTTTGTCGGGGATCTTTCCTGTTCCATAAGTGTCAACAAAAACCGACAAAGGCTCAGGAAC
TCCAATGGCATAAGAGACTTGCACGATGCACCTCCTCGCAAGTCCATTGGCCAGCGTCACCATGAGGGCCGCCAATGACAAAACGGCCAGATGGGTTAAG
GTGGAAGATGGTCTTTTCGTCAAGATACTTCTCAGGAATCACAGGCTTGATCACATGCTGTTTAAGATCTGCCGCAATCTCATCGTTGGTGACAGTCTCA
TCGTGCTGAGTAGAGATGAGCACGGTGTGTACCCGAATCGGAACCATGGCACCCTTGTCATTGTAATACTCAACAGTGACTTGGGTTTTCCCATCTGGCC
TTAGCCACGGGCATGTGCCGTTCTTACGGACCTCGGTCAGGCGAGCACCAAGCTTGGTGGCAAGCACATGGCTCAATGGCATCAATTCAGGGGTCTCGTC
GGTGGCATAGCCAAACATGTGGCCCTGGTCACCAGCACCAATCTCTTCAGGACTCTGCTGCTCAATGTTGACAAGGACCTTGCAGTTGTCCGCGTCAAGA
CCCACATCGTCTGAGACAAACCCAATAGCTCGGCAAGTGTCACGCACGATTTTCTCGTAGTCCACATTGGCTTTGGTTGTGATCTCTCCGAAGACCATGA
CCATGTTGGTCTTGGTGCAAGTCTCACAGGCCACCTTACTATCGGGGTCCTGTTCTAGGCATGCGTCAAGGACTGCATCAGAGATCTGGTCACAGAGTTT
GTCTGGGTGACCCTCGTTCACTGATTCGGAGGTGAACAGGAAGGACTCC