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Detailed information on CNT30638840


BLAST search results

BLAST vs Swiss-Prot:
sp|A9P822|METK1_POPTR, E-value = 3e-130

BLAST vs NONCODE:
NONPOPT000587, E-value = 4e-48

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673153Capsicum annuumSetaria viridis43.2156.3484.55369forward
CNT30520816Capsicum annuumSetaria italica24.9424.6587.79213forward
CNT30641080Capsicum annuumNymphaea colorata69.266.0380.2591forward
CNT30549907Capsicum annuumIpomoea triloba22.3735.5787.96191forward
CNT30515028Capsicum annuumJuglans regia23.7723.9182.76203forward
CNT30698521Capsicum annuumQuercus lobata16.3924.9685140forward
CNT30373104Capsicum annuumArabidopsis thaliana27.2827.7786.7233forward
CNT30618114Capsicum annuumSesamum indicum21.6640.9383.78185forward
CNT30266631Capsicum annuumChenopodium quinoa47.5446.3584.48406forward
CNT3021108Capsicum annuumCitrullus lanatus27.2814.1686.27233forward
CNT30729048Capsicum annuumCorchorus capsularis29.5138.4182.54252forward
CNT30381493Capsicum annuumManihot esculenta27.7531.6486.08237forward
CNT30402638Capsicum annuumBeta vulgaris27.418.2786.32234forward
CNT30524774Capsicum annuumPhaseolus vulgaris39.1146.0782.04334forward
CNT30628391Capsicum annuumVigna unguiculata39.2329.2183.88335forward
CNT30490001Capsicum annuumOlea europaea30.0951.8183.27257forward
CNT30712486Capsicum annuumGlycine max66.5170.9182.92568forward
CNT3047443Capsicum annuumPrunus dulcis39.5828.3380.77338forward
CNT3090332Capsicum annuumSolanum tuberosum25.883494.57221forward
CNT30190465Capsicum annuumSecale cereale22.3766.3285.86191forward
CNT30292894Capsicum annuumTriticum aestivum17.452689.93149forward
CNT30225701Capsicum annuumHordeum vulgare43.0972.380.98368forward
CNT30389985Capsicum annuumTriticum turgidum27.423.0186.75234forward
CNT30508528Capsicum annuumSolanum lycopersicum29.2748.1793.6250forward
CNT30172560Capsicum annuumTrifolium pratense69.6787.3780595forward
CNT30146819Capsicum annuumMedicago truncatula24.4727.8382.78209forward
CNT30441436Capsicum annuumAegilops tauschii24.5941.4281.9210forward
CNT30667060Capsicum annuumTriticum dicoccoides25.5334.3380.73218forward
CNT3059692Capsicum annuumArabidopsis lyrata9.7228.7285.5483forward
CNT30471290Capsicum annuumSaccharum spontaneum24.3623.1687.02208forward
CNT3013982Capsicum annuumZea mays19.6757.9386.31168forward
CNT30606743Capsicum annuumGossypium raimondii37.1229.6881.7317forward
CNT30218287Capsicum annuumKalanchoe fedtschenkoi12.320.2387.62105forward
CNT3066706Capsicum annuumLeersia perrieri15.2238.2486.15130forward
CNT30650126Capsicum annuumRosa chinensis42.3933.3382.32362forward
CNT30624603Capsicum annuumDaucus carota24.4731.6786.12209forward
CNT30681758Capsicum annuumTriticum urartu17.4521.8589.93149forward
CNT30349162Capsicum annuumEragrostis tef27.5225.885.53235forward
CNT30367875Capsicum annuumSorghum bicolor19.9120.5687.06170forward
CNT30620812Capsicum annuumCajanus cajan38.0626.1779.69325forward
CNT30597069Capsicum annuumOryza meridionalis25.5310.8983.03218forward
CNT30358838Capsicum annuumLactuca sativa17.121.3582.19146forward
CNT30420528Capsicum annuumPapaver somniferum25.5311.4483.03218forward
CNT30570674Capsicum annuumVitis vinifera39.2335.4982.39335forward
CNT3055164Capsicum annuumAmborella trichopoda52.2238.7880.49446forward
CNT3022562Capsicum annuumPopulus trichocarpa27.7515.1586.5237forward
CNT3035650Capsicum annuumCucumis melo24.9415.886.38213forward
CNT30148817Capsicum annuumBrachypodium distachyon54.2240.0578.62463forward
CNT30101810Capsicum annuumOryza rufipogon25.538.683.49218forward
CNT30496713Capsicum annuumDigitaria exilis21.7812.3580.65186forward
CNT30174546Capsicum annuumVigna angularis19.9122.2282.35170forward
CNT30113329Capsicum annuumFicus carica23.1918.3886.87198forward
CNT30725315Capsicum annuumLupinus angustifolius27.0522.9684.85231forward

Expression of CNT30638840

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MHLRASPLATILFAACLTMYAPLLSTLVSMMILRPVRPASP*

>peptide 2 (33 aa)
MLLEVVGNLIICNSFIVLSGDENSVDPNWNHGTI

Sequence

>CNT30638840
AATGCACAAGTACTGTCATTTGCACTCGTCATCTGGCATCTGTTTTCAATATATTTTCTGAAGAACACTAGGGATTCCACACACTAATCCTTATGTATAT
AGTTAAGTTTCTTAACATTCCAAGGCCCAAGATATCCAATACAATGGAAACAGGACAATAACCAAAATAGGGTCAAAAGAGAAATACAAAGACAAGCAAT
CACAGAAAATTCTAGAGCCACAAACAAACAACAAAGAACAAAAACATAGGCAAGCACTTTCAGACATTAGTCTTGGGGCTTTTCCCACTTGAGGGGCTTG
ACAACTTCCCATGTGAAATCAGGGTCCTCACGTCCAAAGTGACCATAGGCAGCAGTTTTCAAGAATCTATTGCCGCCCCTCTTTAAATCCAAGTTAATGG
ACATCATTCCAGGTCTGAAGTCGAAGTTCTCCTTAACTATCTTCAAAATTTCCCCGTCGGGGATCTTTCCAGTGCCGTAGGTGTCAACGAATACGGACAA
TGGCTCAGGCACACCGATGGCATAAGAAACCTGCACAATGCATCTGCGAGCGAGTCCACTAGCTACAATACTCTTTGCAGCCTGCCTTACGATGTATGCA
CCACTCCTGTCAACCTTGGTGTCGATGATGATCTTACGACCAGTGAGACCAGCATCACCATGAGGTCCACCAATAACAAATCGGCCTGATGGGTTAAGGT
GGAAGATTGTCTTCTCATCAAGGTACTTCTCTGGGATGACTGGCTTGATGACATGCTCCTTGAGGTCGTGGGCAATCTCATCATTTGTAACAGTTTCATC
GTGTTGAGTGGAGATGAGAACAGTGTGGACCCTAACTGGAACCATGGCACCATT