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Detailed information on CNT30158121


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9AT56|METK1_ELAUM, E-value = 3e-135

BLAST vs NONCODE:
NONPOPT000587, E-value = 2e-46

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673492Pistacia veraSetaria viridis65.642.0982.2410forward
CNT30520816Pistacia veraSetaria italica29.4421.390.76184forward
CNT30641080Pistacia veraNymphaea colorata24.3216.9888.82152forward
CNT30549907Pistacia veraIpomoea triloba24.3228.3186.84152forward
CNT30515028Pistacia veraJuglans regia40.9630.1583.2256forward
CNT30698521Pistacia veraQuercus lobata23.5226.287.76147forward
CNT30374815Pistacia veraArabidopsis thaliana59.8490.5681.02374forward
CNT30618114Pistacia veraSesamum indicum1622.1284100forward
CNT30266655Pistacia veraChenopodium quinoa45.7625.4484.97286forward
CNT3021108Pistacia veraCitrullus lanatus30.8811.7388.08193forward
CNT30729630Pistacia veraCorchorus capsularis29.1222.2288.46182forward
CNT30381493Pistacia veraManihot esculenta30.8825.7790.16193forward
CNT30402638Pistacia veraBeta vulgaris54.2426.4685.55339forward
CNT30524807Pistacia veraPhaseolus vulgaris25.2817.9189.24158forward
CNT30628634Pistacia veraVigna unguiculata50.0843.4787.22313forward
CNT30194995Pistacia veraPisum sativum2818.3884175forward
CNT30495282Pistacia veraOlea europaea26.089.2685.89163forward
CNT30712018Pistacia veraGlycine max4856.583300forward
CNT3047442Pistacia veraPrunus dulcis45.647.0382.81285forward
CNT3090332Pistacia veraSolanum tuberosum43.0441.3884.39269forward
CNT30181754Pistacia veraSecale cereale26.7226.5586.83167forward
CNT30292894Pistacia veraTriticum aestivum28.6431.2488.27179forward
CNT30225924Pistacia veraHordeum vulgare28.6431.7987.15179forward
CNT30389985Pistacia veraTriticum turgidum28.6417.688.27179forward
CNT30561874Pistacia veraActinidia chinensis31.222.1187.69195forward
CNT3086110Pistacia veraVigna radiata23.3613.0684.25146forward
CNT30508429Pistacia veraSolanum lycopersicum15.238.4686.3295forward
CNT30172560Pistacia veraTrifolium pratense22.420.5687.86140forward
CNT30144304Pistacia veraMedicago truncatula26.7225.9785.63167forward
CNT30437887Pistacia veraAegilops tauschii27.6824.7187.86173forward
CNT30662024Pistacia veraTriticum dicoccoides5263.9882.77325forward
CNT3082721Pistacia veraBrassica juncea29.2863.3286.34183forward
CNT30471290Pistacia veraSaccharum spontaneum29.4420.4990.22184forward
CNT3013982Pistacia veraZea mays12.1626.2194.7476forward
CNT30608385Pistacia veraGossypium raimondii26.43089.7165forward
CNT30218668Pistacia veraKalanchoe fedtschenkoi2032.384.8125forward
CNT30650534Pistacia veraRosa chinensis69.2846.4686.14433forward
CNT30212612Pistacia veraHelianthus annuus25.666.3988.12160forward
CNT30624603Pistacia veraDaucus carota54.2451.3683.78339forward
CNT30686961Pistacia veraTriticum urartu78.8856.8680.12493forward
CNT30349160Pistacia veraEragrostis tef48.3232.5885.43302forward
CNT30477100Pistacia veraArabidopsis halleri15.224.0585.2695forward
CNT30368062Pistacia veraSorghum bicolor26.2414.9290.85164forward
CNT30620812Pistacia veraCajanus cajan68.6434.5479.95429forward
CNT30597069Pistacia veraOryza meridionalis29.449.286.96184forward
CNT30355133Pistacia veraLactuca sativa30.0821.4981.91188forward
CNT30421092Pistacia veraPapaver somniferum34.8832.6381.65218forward
CNT30571189Pistacia veraVitis vinifera95.6897.0889.63598forward
CNT3055182Pistacia veraAmborella trichopoda28.6416.9385.47179forward
CNT3025883Pistacia veraPopulus trichocarpa58.0832.3288.15363forward
CNT3035650Pistacia veraCucumis melo39.5218.3288.66247forward
CNT30148817Pistacia veraBrachypodium distachyon25.4413.7591.19159forward
CNT30101810Pistacia veraOryza rufipogon47.0411.684.69294forward
CNT30116702Pistacia veraOryza nivara27.6816.8582.66173forward
CNT30174554Pistacia veraVigna angularis69.2860.3182.68433forward
CNT30113343Pistacia veraFicus carica30.453.6788.95190forward
CNT30725315Pistacia veraLupinus angustifolius29.9218.5988.77187forward

Expression of CNT30158121

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MLTRTLQLSASRPTSSETNPMERHVSRTIFS*

>peptide 2 (33 aa)
MLRGDENSVNTDWNHGTVLVVVLHSDLGLTIWP*

>peptide 3 (34 aa)
MTKRPDGLRWKMVFSSRYFSGMTVSSCCVEMRTV*

>peptide 4 (46 aa)
TPIHLSRVFSGEGATTMGSPATIGVNDDLTSCETSITVRATNDKTA*

>peptide 5 (68 aa)
MPLVTSTDLLWALGEVTVNTLGNIRALLLNVDQDFAVVGIETHIIRNKSDGAACITNDLLIVYVGLGGN

Sequence

>CNT30158121
CACTCCTATCCACCTTAGTAGGGTCTTTTCCGGAGAAGGCGCCACCACCATGGGCTCCCCAGCCACCATAGGTGTCAATGATGATCTTACGTCCTGTGAG
ACCAGCATCACCGTGAGGGCCACCAATGACAAAACGGCCTGATGGGTTAAGGTGGAAGATGGTCTTCTCGTCAAGGTACTTCTCGGGGATGACAGTCTCA
TCATGTTGCGTGGAGATGAGAACAGTGTGAACACGGACTGGAACCATGGCACCGTTCTCGTTGTAGTACTCCACAGTGACCTGGGTCTTACCATCTGGCC
TTAGCCAAGGGCAGGTACTATTTTTCCTAACCTCTGTGAGGCGAGCACCAAGCTTGGTTGCAAGGACATGGCTTAGAGGCATGAATTCAGGGGTTTCATC
AGTGGCATAACCAAACATATGCCCCTGGTCACCAGCACCGATCTCCTCTGGGCGCTTGGTGAAGTGACCGTGAACACCCTGGGCAATATCAGGGCTCTGT
TGCTCAATGTTGACCAGGACTTTGCAGTTGTCGGCATCGAGACCCACATCATCAGAAACAAATCCGATGGAGCGGCATGTATCACGAACGATCTTCTCAT
AGTCTACGTTGGCCTTGGTGGTAAT