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Detailed information on CNT3021108


BLAST search results

BLAST vs Swiss-Prot:
sp|P31155|METK1_PETCR, E-value = 4e-108

BLAST vs NONCODE:
NONPOPT000587, E-value = 6e-95

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672441Citrullus lanatusSetaria viridis18.3538.9786.09302forward
CNT30520816Citrullus lanatusSetaria italica20.1738.4385.24332forward
CNT30641080Citrullus lanatusNymphaea colorata16.9531.1786.38279forward
CNT30549907Citrullus lanatusIpomoea triloba15.3747.1182.61253forward
CNT30515028Citrullus lanatusJuglans regia14.5228.1582.85239forward
CNT30698521Citrullus lanatusQuercus lobata15.0144.0385.83247forward
CNT30373104Citrullus lanatusArabidopsis thaliana22.7244.5884.22374forward
CNT30618114Citrullus lanatusSesamum indicum13.4348.8984.62221forward
CNT30266631Citrullus lanatusChenopodium quinoa11.0620.7885.71182forward
CNT30729630Citrullus lanatusCorchorus capsularis18.7137.6185.71308forward
CNT30381460Citrullus lanatusManihot esculenta24.1243.284.63397forward
CNT30402638Citrullus lanatusBeta vulgaris28.3136.3886.7466forward
CNT30524850Citrullus lanatusPhaseolus vulgaris22.1150.4284.62364forward
CNT30628391Citrullus lanatusVigna unguiculata33.1147.5283.49545forward
CNT30194995Citrullus lanatusPisum sativum12.3321.3283.25203forward
CNT30712616Citrullus lanatusGlycine max18.7137.8886.69308forward
CNT3047442Citrullus lanatusPrunus dulcis13.7337.2982.74226forward
CNT30158121Citrullus lanatusPistacia vera11.7330.8888.08193forward
CNT30638840Citrullus lanatusCapsicum annuum14.1627.2886.27233forward
CNT3090332Citrullus lanatusSolanum tuberosum16.441.5485.56270forward
CNT30181754Citrullus lanatusSecale cereale16.8944.285.61278forward
CNT30294498Citrullus lanatusTriticum aestivum19.3839.9286.52319forward
CNT30225924Citrullus lanatusHordeum vulgare19.3256.4885.53318forward
CNT30389985Citrullus lanatusTriticum turgidum27.2844.1585.75449forward
CNT30561874Citrullus lanatusActinidia chinensis20.2337.7687.69333forward
CNT3086464Citrullus lanatusVigna radiata5.5345.0584.6291forward
CNT30508545Citrullus lanatusSolanum lycopersicum10.8743.2484.36179forward
CNT30172560Citrullus lanatusTrifolium pratense18.3544.3584.77302forward
CNT30144304Citrullus lanatusMedicago truncatula2461.4385.06395forward
CNT30437887Citrullus lanatusAegilops tauschii17.2540.5786.27284forward
CNT30667060Citrullus lanatusTriticum dicoccoides20.6653.5481.18340forward
CNT30471290Citrullus lanatusSaccharum spontaneum27.6450.6783.3455forward
CNT3013982Citrullus lanatusZea mays15.0185.1785.02247forward
CNT30608385Citrullus lanatusGossypium raimondii21.263.4584.53349forward
CNT30218287Citrullus lanatusKalanchoe fedtschenkoi17.9857.0384.8296forward
CNT3066706Citrullus lanatusLeersia perrieri7.1734.7186.44118forward
CNT30650282Citrullus lanatusRosa chinensis17.1924.0283.75283forward
CNT30624603Citrullus lanatusDaucus carota18.5946.3686.6306forward
CNT30686785Citrullus lanatusTriticum urartu24.6740.284.73406forward
CNT30349162Citrullus lanatusEragrostis tef27.6449.9583.08455forward
CNT30477100Citrullus lanatusArabidopsis halleri9.8441.0182.1162forward
CNT30368062Citrullus lanatusSorghum bicolor16.5224.7585.66272forward
CNT30620815Citrullus lanatusCajanus cajan10.1522.8584.43167forward
CNT30597069Citrullus lanatusOryza meridionalis27.6422.7482.42455forward
CNT30358838Citrullus lanatusLactuca sativa14.5234.9481.59239forward
CNT30429132Citrullus lanatusPapaver somniferum2424.9181.52395forward
CNT30571189Citrullus lanatusVitis vinifera11.9731.9885.79197forward
CNT3055164Citrullus lanatusAmborella trichopoda17.3824.8781.82286forward
CNT3022562Citrullus lanatusPopulus trichocarpa28.3129.883.69466forward
CNT3035650Citrullus lanatusCucumis melo31.5338.594.8519forward
CNT30331991Citrullus lanatusDioscorea rotundata12.5843.7683.57207forward
CNT30101941Citrullus lanatusOryza rufipogon18.3536.1781.13302forward
CNT30496713Citrullus lanatusDigitaria exilis18.3520.0581.79302forward
CNT30174546Citrullus lanatusVigna angularis14.0930.3384.48232forward
CNT30113329Citrullus lanatusFicus carica17.1926.2888.34283forward
CNT30725315Citrullus lanatusLupinus angustifolius28.3146.3285.19466forward

Expression of CNT3021108

Peptides detected in this lncRNA

>peptide 1 (78 aa)
MLFEVCSDLVIGDGFIVLGGDKNCVHTDGNHGAIVVVVLNSDLGLAIRSQPGAGVEHRIGDLVTELVGVTLIYRFRGK*

>peptide 2 (46 aa)
MTNKKNFDLARDLGNQETITRKPRKTSAPTSFILLTNRIGPFNNVK*

>peptide 3 (41 aa)
MNHKHGQSFIKRKMAMNEWWNRARKPDEIGSVDLKERKNLS*

>peptide 4 (36 aa)
LKSKFSFTICRISLSGIFPVLYVSTKTDSGSGTPMA*

>peptide 5 (32 aa)
MYRQKLIAALAHQWRKRLGQCTCVQARWQLCS*

>peptide 6 (79 aa)
MMILRPVRPASPCGPPMTKRPEGLRWKMVFSSRYFSGMTGLMTCSLRSAAISSLVTVSSCWVEIRTVCTRTGTMAPLSL*

Sequence

>CNT3021108
CTGAAGTCGAAGTTTTCTTTCACGATTTGCAGGATTTCCTTGTCGGGGATCTTCCCGGTTTTGTATGTATCGACAAAAACTGATAGCGGCTCTGGCACAC
CAATGGCGTAAGAGACTTGGACAATGCACCTGCGTGCAAGCCCGCTGGCAACTATGCTCTTAGCAGCCTGCCTGACAATGTAGGCACCACTCCTATCGAC
CTTGGTGGGATCCTTTCCGGAGAAAGCACCACCACCGTGAGCTCCCCAACCACCATAGGTATCGATGATGATCTTGCGTCCGGTAAGACCTGCATCACCA
TGTGGACCACCAATGACAAAGCGGCCTGAGGGGTTAAGGTGGAAGATGGTCTTCTCATCGAGGTACTTCTCGGGGATGACTGGCTTGATGACATGCTCTT
TGAGGTCTGCAGCGATCTCGTCATTGGTGACGGTTTCATCGTGTTGGGTGGAGATAAGAACTGTGTGCACACGGACGGGAACCATGGCGCCATTGTCGTT
GTAGTACTCAACAGTGACTTGGGTCTTGCCATCAGGTCTCAACCAGGGGCAGGCGTCGAGCACCGCATCGGAGATCTGGTCACAGAGCTTGTCGGGGTGA
CCCTCATTTACAGATTCAGAGGTAAATAGAAAGGTCTCCATCTCTGAAACATAACAAAAACCATATTAGTTCGTGTACAAAAATATTCAGTTCATTCGTT
AAGTTTTAGTCACATTCAGTTAGATAGCTACTGCTTATGTAATGCTTGGGCTTGGAAATATCATCAGTTACCACATAGCACACTTGGAAGCAAACTCATC
TTGAAATCAATGATAGGATTATAGAAATATTGGTAATACAAGCACAGATTCAAAAGTTTCAAAGAAAATTATAGAGAATTTTAAAGAATGGAAATGACTC
GACAAATCTGAACAGCCAAACAGGATTCAAGAGTAGGGAGACAACAAAATTAAAATTGGAAAATACAAGATCTGCCCTAAGGAATCCTTCACTCATGTAA
AAGGCGACTGGATCTACAACAATTCGACCACAGAGATAGTCCGCTACCAAATCGAATGACCAACAAAAAAAACTTTGATCTAGCCAGAGATCTAGGGAAT
CAAGAAACCATAACACGAAAACCGCGAAAAACCAGTGCGCCGACATCATTTATTTTACTTACAAATCGGATCGGGCCATTCAACAATGTCAAATAGAAGC
TGACAACCAAAACAGAGCTATCAGAAAACAATAGAAAAACCCAACGCCCGAGATCTAGAATCTCAGGGAGCACAAAACAGTATCGAAGTTTCACTCACTA
GTTCCCAAAGAAATATTCAAAAGAACTGTCAGATCTGGAAGAATTCACATCTCAGAAGAAGAGAAACAGACTAAGAGCACCAGACAACGGATTCACACAT
CAAAACAAACAAATCTAACAGTACCACTAGAATACAAAGAGGGAAAAATCCCCTAAATTCCTTTCATAAACCAGCAAAGAAGAGGGGAAATGAACCACAA
GCATGGTCAAAGCTTCATTAAAAGAAAAATGGCAATGAATGAGTGGTGGAACAGAGCTCGCAAACCTGATGAAATCGGCAGCGTAGATCTGAAAGAGAGA
AAGAATTTGAGCTGATACGCCAACCGAACCAGACCTCTATAAGAAC