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Detailed information on CNT30174161


BLAST search results

BLAST vs Swiss-Prot:
sp|P49613|METK2_PEA, E-value = 7e-93

BLAST vs NONCODE:
NONTPRT001916, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673492Trifolium pratenseSetaria viridis45.7537.0680.61361forward
CNT30549907Trifolium pratenseIpomoea triloba34.8551.2183.64275forward
CNT30374815Trifolium pratenseArabidopsis thaliana19.6537.5386.45155forward
CNT30266655Trifolium pratenseChenopodium quinoa48.9234.3483.16386forward
CNT30729630Trifolium pratenseCorchorus capsularis26.4925.5282.78209forward
CNT30194995Trifolium pratensePisum sativum41.9534.7794.86331forward
CNT30495282Trifolium pratenseOlea europaea48.9221.9282.38386forward
CNT30711739Trifolium pratenseGlycine max36.524.0686.81288forward
CNT3090332Trifolium pratenseSolanum tuberosum41.4450.3186.24327forward
CNT30561874Trifolium pratenseActinidia chinensis35.2331.5284.53278forward
CNT3086110Trifolium pratenseVigna radiata37.926.7482.94299forward
CNT30144438Trifolium pratenseMedicago truncatula41.8367.4895.76330forward
CNT30310308Trifolium pratenseCamelina sativa17.3659.3185.4137forward
CNT3082721Trifolium pratenseBrassica juncea7.4820.4289.8359forward
CNT30471855Trifolium pratenseSaccharum spontaneum47.0240.3381.67371forward
CNT30606743Trifolium pratenseGossypium raimondii31.4323.2283.47248forward
CNT30650282Trifolium pratenseRosa chinensis48.5432.5183.81383forward
CNT30212612Trifolium pratenseHelianthus annuus27.1288.883.64214forward
CNT30368076Trifolium pratenseSorghum bicolor45.7533.1581.16361forward
CNT30620812Trifolium pratenseCajanus cajan30.1619.1683.19238forward
CNT30597062Trifolium pratenseOryza meridionalis46.2633.1879.45365forward
CNT30420528Trifolium pratensePapaver somniferum47.2819.5782.57373forward
CNT30571189Trifolium pratenseVitis vinifera28.937.0185.53228forward
CNT3055147Trifolium pratenseAmborella trichopoda22.6918.4983.24179forward
CNT3024331Trifolium pratensePopulus trichocarpa45.3734.3281.28358forward
CNT3035650Trifolium pratenseCucumis melo50.1929.3882.32396forward
CNT30101810Trifolium pratenseOryza rufipogon47.0214.6479.78371forward
CNT30116702Trifolium pratenseOryza nivara32.5725.0280.54257forward
CNT30174424Trifolium pratenseVigna angularis48.9247.4883.94386forward

Expression of CNT30174161

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MLTRTLQLSASRPTSSETNPMFLHVLRTIFS*

>peptide 2 (35 aa)
MQLCSLDLAQGKHQEQHQRSGRKVCRGVPRSLIQM*

>peptide 3 (40 aa)
ERGVHNKNYNYFVTIMIVGNIQNSMFDKIGIIITLHLCSR*

>peptide 4 (69 aa)
MSISSSLQKPAIPTPQKIKVNRDHSRPKVKGFLNNVKDFLVGDRSSTIRINENRQWLRNTNSIGNLHKA*

>peptide 5 (30 aa)
MAMNTLSNIRTLLFNVDKNFAVVSIKTNII*

Sequence

>CNT30174161
GGGAGAGGGGGGTACACAATAAAAATTATAACTATTTTGTTACAATCATGATTGTAGGCAACATCCAAAACTCCATGTTTGACAAGATTGGAATCATCAT
CACACTTCACTTATGCAGTAGATAACTTTCCTCCCTTGAGTGGCTTAACAACTTCCCATGTGAAATCAGCATCATCTCTACCAAAATGTCCATAAGCAGC
AGTCTTCAAAAACCTGCTATTCCCACCCCTCAAAAGATCAAGGTTAATAGAGATCATTCCAGGCCTAAAGTCAAAGGTTTCCTTAACAATGTTAAGGATT
TCCTTGTCGGGGATCGTTCCAGTACCATAAGAATCAACGAAAACAGACAATGGCTCAGGAACACCAATAGCATAGGAAACTTGCACAAGGCATAAATTCC
GGTGTCTCATCAGTGGCATACCCGAACATGTGACCTTGATCACCAGCACCGATTTCCTCAGGTCTTTTTGTGAGATGGCCATGAACACCTTGAGCAATAT
CAGGACTCTGTTGTTCAATGTTGACAAGAACTTTGCAGTTGTCAGCATCAAGACCAACATCATCTGAAACAAATCCTATGTTCCTGCATGTGTTACGGAC
AATCTTTTCATAGTCAACATTGGCTTTTGTTGTGATCTCACCAAAAACCATAACCATATTGGTCTTTGTGCAAGTTTCACATGCAACTTTGCTCTCTGGA
TCTTGCTCAAGGCAAGCATCAAGAACAGCATCAGAGATCTGGTCGCAAAGTTTGTCGGGGTGTCCCTCGTTCACTGATTCAGATGTGAA