Detailed information on CNT30711739


BLAST search results

BLAST vs Swiss-Prot:
sp|P31155|METK1_PETCR, E-value = 3e-67

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30521125Glycine maxSetaria italica28.5752.1381.29342forward
CNT30549907Glycine maxIpomoea triloba19.7243.9587.29236forward
CNT30515028Glycine maxJuglans regia51.2172.283.69613forward
CNT30374815Glycine maxArabidopsis thaliana25.2373.1281.79302forward
CNT30266730Glycine maxChenopodium quinoa24.2325.8984.48290forward
CNT30194995Glycine maxPisum sativum25.1531.6289.04301forward
CNT3047443Glycine maxPrunus dulcis49.8750.0485.59597forward
CNT30561874Glycine maxActinidia chinensis33.0844.985.61396forward
CNT30174161Glycine maxTrifolium pratense24.0636.586.81288forward
CNT30144438Glycine maxMedicago truncatula25.0661.3586.67300forward
CNT30310308Glycine maxCamelina sativa18.6396.5482.06223forward
CNT30218668Glycine maxKalanchoe fedtschenkoi12.237.7389.04146forward
CNT30650282Glycine maxRosa chinensis24.4824.8788.05293forward
CNT30477100Glycine maxArabidopsis halleri8.2725.0685.8699forward
CNT30597062Glycine maxOryza meridionalis21.9723.9184.79263forward
CNT30358838Glycine maxLactuca sativa14.224.8581.18170forward
CNT30432398Glycine maxPapaver somniferum24.3123.9783.85291forward
CNT30570674Glycine maxVitis vinifera42.1153.3984.33504forward
CNT30331991Glycine maxDioscorea rotundata13.4534.0483.23161forward
CNT30148817Glycine maxBrachypodium distachyon23.7324.5785.56284forward
CNT30116702Glycine maxOryza nivara21.9725.6184.41263forward

Expression of CNT30711739

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MLTRTLQLSASRPTSSETKPMFLHVSRTIFS*

>peptide 2 (63 aa)
MLVLVQVSQATLLSGSCSKHASSTASEIWSQSLSGCPSFTDSDVNRKVSWAILTSVEEREMVA*

>peptide 3 (93 aa)
MLCGDEHSVDADWNHGTLVIVVLNSDLGLAIRSQPRACPVLPNLGELGTELRGKDMAQGHELGSLVSGIAEHMTLVTSTNLLRPLCEDSVAQC*

Sequence

>CNT30711739
CATAAAAAAATACAGAAAAAAAAAAACAGAATTGAGTAAGAGGGAAGGAAACATAGAGAAAATTTTAGCAATCAGATAATAAGAAGCCAGTAGTAGTGCA
AAAGTCCCTTGCCAAGAGTGTTGGAACCCCTTTTAGTTAAGCAGGTACCTTCTCCCCCTTGAGTGGCTTCACCACTTCCCATGTGAAGTCAGGGTCATCT
CTGCCAAAGTGTCCATATGCAGCAGTCTTCAAGAACCTGCCATTTCCACCCCTCTTGAGATCAAGGTTGATGGAGATCATGCCAGGCCTGAAGATTTCCT
TGTCAGGGATCTTCCCAGTGCCATAAGTGTCAACAAACACAGACAAGGGCTCAGGCACACCAATGGCATAGGAAACTTGCACAATTGCCCTCCTAGCAAG
TCCATTTGCAACAATGCTCTTTGCAGCTTGCCTCACAATGTAGGCACCACTCCTATCAACCTTGGTAGGATCCTTCCCAGAGAAGGCTTAATCACGTGTT
CTTTAAGATCAGCTGCAATCTCATCATTTGTGACAGTCTCATCATGCTGTGTGGAGATGAGCACAGTGTGGACGCGGATTGGAACCATGGCACCCTTGTC
ATTGTAGTACTCAACAGTGACTTGGGTCTTGCCATCAGGTCTCAGCCAAGGGCATGTCCCGTTCTTCCGAACCTCGGTGAGCTTGGCACCGAGCTTCGTG
GCAAGGACATGGCTCAAGGGCATGAGCTCGGGAGTCTCGTCAGTGGCATAGCCGAACATATGACCTTGGTCACCAGCACCAATCTCCTCAGGCCTCTTTG
TGAGGACTCTGTTGCTCAATGTTGACGAGGACCTTGCAGTTGTCAGCATCAAGACCAACATCATCAGAGACAAAACCAATGTTCCTGCATGTGTCACGCA
CAATCTTCTCATAGTCCACGTTGGCCTTGGTTGTGATCTCTCCGAAAACCATCACCATGTTGGTCTTGGTGCAGGTTTCACAGGCAACCTTGCTGTCAGG
GTCCTGCTCCAAGCATGCATCGAGCACAGCATCGGAGATCTGGTCACAGAGCTTGTCAGGGTGCCCCTCGTTCACTGATTCAGATGTGAATAGGAAAGTT
TCTTGGGCCATTTTAACTTCTGTAGAAGAGAGAGAGATGGTAGCTTGAACAGACAGTAACCCGCTTTGTGCTGTTGTTAAGTCTGCTCAAGCGGTGC