Detailed information on CNT30190465


BLAST search results

BLAST vs Swiss-Prot:
sp|Q4LB21|METK4_HORVU, E-value = 5e-62

BLAST vs NONCODE:
NONPOPT000587, E-value = 5e-36

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675250Secale cerealeSetaria viridis51.7449.3493.96149forward
CNT30549907Secale cerealeIpomoea triloba60.0732.2284.97173forward
CNT30618114Secale cerealeSesamum indicum56.9436.2882.93164forward
CNT30266631Secale cerealeChenopodium quinoa59.0319.4188.24170forward
CNT30381356Secale cerealeManihot esculenta63.1962.5487.36182forward
CNT30524807Secale cerealePhaseolus vulgaris67.362284.02194forward
CNT30712486Secale cerealeGlycine max67.3624.2286.6194forward
CNT30638840Secale cerealeCapsicum annuum66.3222.3785.86191forward
CNT3090332Secale cerealeSolanum tuberosum65.2828.9286.17188forward
CNT3013982Secale cerealeZea mays62.8562.4191.71181forward
CNT30349162Secale cerealeEragrostis tef67.7121.4191.79195forward
CNT30367875Secale cerealeSorghum bicolor63.5422.1391.8183forward
CNT30620815Secale cerealeCajanus cajan36.4614.3686.67105forward

Expression of CNT30190465

Peptides detected in this lncRNA

>peptide 1 (95 aa)
ASETSIAVRSTNDKAARWVEMEDGILIKVLLWDDRLNHMLLQISSNLIIGHCLIMLGGDEHSVDTYRDLHSHLGLAIRPQPWAGGVLADLSETSTK

>peptide 2 (83 aa)
MTKRPDGLRWKMVFSSRYCSGMTGLITCSFRSAAISSLVTVSSCWVEMSTVWTRIGTSTVTWVLPSGLNHGQVAFLRTSVRRAP

Sequence

>CNT30190465
GCCAGTGAGACCAGCATCGCCGTGAGGTCCACCAATGACAAAGCGGCCAGATGGGTTGAGATGGAAGATGGTATTCTCATCAAGGTACTGCTCTGGGATG
ACAGGCTTAATCACATGCTCCTTCAGATCAGCAGCAATCTCATCATTGGTCACTGTCTCATCATGCTGGGTGGAGATGAGCACAGTGTGGACACGTATAG
GGACCTCCACAGTCACCTGGGTCTTGCCATCAGGCCTCAACCATGGGCAGGTGGCGTTCTTGCGGACCTCAGTGAGACGAGCACCAAG