Detailed information on CNT30376698


BLAST search results

BLAST vs Swiss-Prot:
sp|P17562|METK2_ARATH, E-value = 9e-112

BLAST vs NONCODE:
NONPOPT000587, E-value = 4e-32

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30549907Arabidopsis thalianaIpomoea triloba29.3736.3185.13195forward
CNT30381524Arabidopsis thalianaManihot esculenta42.4734.183.69282forward
CNT30712018Arabidopsis thalianaGlycine max42.7753.4882.04284forward
CNT30508545Arabidopsis thalianaSolanum lycopersicum18.5229.7186.18123forward
CNT30218287Arabidopsis thalianaKalanchoe fedtschenkoi17.0221.7788.5113forward
CNT3022500Arabidopsis thalianaPopulus trichocarpa41.8741.4983.09278forward

Expression of CNT30376698

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MSLSRSSGSPCLESTLFRKCQRRQTMARVLQWRMRPGQEPCEPCH*

>peptide 2 (68 aa)
MSSPSSVCVNDDLTWKMVLSSRYFSGMIGLITCSLRSRAISSLVTVSSCWVEIRTVWTRTGTIAPLSL*

>peptide 3 (68 aa)
VVSSEMSIRCRFLKPSISSSLQVQVDCHHSWSEIECLFHDLQDLLVWNQPCSVSVNEDRQWLGYSNGV*

Sequence

>CNT30376698
GGGTCGTCTCTTCCGAAATGTCCATACGCTGCCGTTTTCTGAAACCTTCCATTTCCTCCTCTCTTCAAGTCCAAGTTGATTGTCATCATTCCTGGTCTGA
AATCGAATGTCTCTTTCACGATCTTCAGGATCTCCTTGTCTGGAATCAACCCTGTTCCGTAAGTGTCAACGAAGACAGACAATGGCTCGGGTACTCCAAT
GGCGTATGAGACCTGGACAAGAGCCCTGCGAGCCATGCCATTAGCCACCACACTCTTTGCTGCTTGCCTCACGATGTAAGCTCCACTTCTGTCGACTTTG
GTTGGGTCTTTGCCTGAGAAAGCACCACCTCCATGAGCTCCCCATCCTCCGTATGTGTCAATGATGATCTTACGTGGAAGATGGTTTTGTCGTCAAGGTA
TTTCTCTGGGATGATTGGTTTGATCACATGCTCCTTGAGGTCACGCGCAATCTCGTCATTGGTAACGGTTTCATCGTGCTGGGTTGAGATCAGGACGGTG
TGGACACGGACTGGAACCATAGCGCCATTGTCATTGTAGTACTCAACAGTGACTTGGGTCTTGCCATCTGGTCTTAACCAACGGCAAGTTCCATTCTTCC
TGACTTCAGTGAGACGAGCACCAATCTTGGTTGCAAGGACATGACTCAAAGGCATGAGCTCAGG