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Detailed information on CNT30495282


BLAST search results

BLAST vs Swiss-Prot:
sp|P50303|METK3_ACTCC, E-value = 4e-87

BLAST vs NONCODE:
NONORUT006297, E-value = 4e-13

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673492Olea europaeaSetaria viridis20.7337.4781.1365forward
CNT30549907Olea europaeaIpomoea triloba15.9652.3385.05281forward
CNT30515028Olea europaeaJuglans regia16.9235.182.55298forward
CNT30374815Olea europaeaArabidopsis thaliana9.1438.9883.85161forward
CNT30266655Olea europaeaChenopodium quinoa22.9435.9483.42404forward
CNT30194995Olea europaeaPisum sativum18.1733.6183.44320forward
CNT30712013Olea europaeaGlycine max20.982.3382.34368forward
CNT30158121Olea europaeaPistacia vera9.2626.0885.89163forward
CNT3090332Olea europaeaSolanum tuberosum18.1749.2385.31320forward
CNT30181754Olea europaeaSecale cereale11.9833.5582.94211forward
CNT30294498Olea europaeaTriticum aestivum12.3827.2883.94218forward
CNT30561874Olea europaeaActinidia chinensis17.2134.3582.84303forward
CNT3086110Olea europaeaVigna radiata15.7924.8781.65278forward
CNT30508429Olea europaeaSolanum lycopersicum3.2423.0892.9857forward
CNT30174161Olea europaeaTrifolium pratense21.9248.9282.38386forward
CNT30144438Olea europaeaMedicago truncatula18.1765.4482.81320forward
CNT30662024Olea europaeaTriticum dicoccoides6.0821.0685.05107forward
CNT30310308Olea europaeaCamelina sativa3.5226.8488.7162forward
CNT3082721Olea europaeaBrassica juncea7.9548.4483.57140forward
CNT30471855Olea europaeaSaccharum spontaneum22.9443.9181.93404forward
CNT30650282Olea europaeaRosa chinensis23.1134.5584.77407forward
CNT30212612Olea europaeaHelianthus annuus11.3682.9982.5200forward
CNT30624603Olea europaeaDaucus carota12.3833.0383.94218forward
CNT30681758Olea europaeaTriticum urartu11.8130.582.21208forward
CNT30368076Olea europaeaSorghum bicolor20.7333.5281.64365forward
CNT30597062Olea europaeaOryza meridionalis20.2232.3681.46356forward
CNT30432398Olea europaeaPapaver somniferum22.0932.0481.75389forward
CNT30571189Olea europaeaVitis vinifera12.6636.284.3223forward
CNT3055147Olea europaeaAmborella trichopoda11.1920.3581.73197forward
CNT3022500Olea europaeaPopulus trichocarpa16.6443.7385.32293forward
CNT3035650Olea europaeaCucumis melo23.1130.1983.78407forward
CNT30148817Olea europaeaBrachypodium distachyon22.634.4381.91398forward
CNT30101810Olea europaeaOryza rufipogon22.7715.8281.8401forward
CNT30116702Olea europaeaOryza nivara19.0232.6280335forward
CNT30174424Olea europaeaVigna angularis21.244681.02374forward
CNT30113343Olea europaeaFicus carica6.0229.9489.62106forward

Expression of CNT30495282

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MLFSFSCLSYQDEIAGQPSRKGDDFRVDISHVVEMLFEGNEIPNLLI*

>peptide 2 (41 aa)
QGSHLWHSQTCDPDHPHQSPLDAWLGGRGHLEQYQGSVAQC*

>peptide 3 (32 aa)
MTIIPTQLNQSKTQIHSLTHIKLGQHYKQQTH*

>peptide 4 (38 aa)
MNLNETSKALTLIQHRFCQKKTLENFKQLLILQYTEFM*

>peptide 5 (31 aa)
MLTKTLHLSASRPTLSDVNPMLRQVSRTIFS*

Sequence

>CNT30495282
TCAGGGGTCTCATCTGTGGCATAGCCAAACATGTGACCCTGATCACCCGCACCAATCTCCTCTGGACGCTTGGTTAGGTGGCCGTGGACACCTTGAGCAA
TATCAGGGCTCTGTTGCTCAATGTTAACTAAGACCTTGCACTTGTCCGCATCAAGACCAACATTATCTGACGTGAATCCTATGTTACGGCAGGTGTCACG
CACAATCTTCTCATAGTCGATATTGCCTTTGGTTGTGATCTCACCGAATACCATTACCATGTTCGTCTTGGTACAAGTCTCGCAGGCAACTTTGCTATCG
GGATCCTGTTCGAGGCAGGCATCAAGCACTGCATCTGATATCTGATCACAAAGCTTGTCAGGGTGGCCCTCGTTTACAGATTCAGAGGTGAATAGGAAGG
TGTCCATGTTTTCAACCTGAATAAGTTGATTTACATTCAAAACATATAAGCTCACAAGTATAATTCAACTCCGTCATGTAAGGAAAATATAACATACATT
ATAAAATCAGGCTTCCTATCAGGCACTATAAACCTAGTAAATTTTGATTTTTGAATTAGCACCAAACGTGTACTTCTCTTACAGGTGGAATATATGCGTA
TTTAGTGAGTGCTTAAGAAAACAGAATACAGAGTATATGGCCAGGAAAAGCATTTGATAATTTCTGAAAAGGTCATGATCCACCCAACAAGTTCTTTTGC
AGACACTAATGGGGAAAAAAGTATACAGCAATATATTCCGTAGAATAGATTCTGAAATAAAAGGTGCGTTTTAACTTTGCAATTAGAAAGAATTTCTGCA
CCTACTTAACCAAACAAAGAAGCCAACTGTACCAATTTTGGAACAAAGGGTCCAGATGTTATTTTCATTTTCTTGTTTAAGCTACCAAGATGAGATTGCT
GGACAGCCTTCCAGGAAAGGGGATGATTTCAGGGTTGACATCTCACATGTAGTAGAGATGTTATTCGAAGGAAACGAAATACCCAATCTATTGATTTAAC
GACTAAAATACATTCTGAACATTGAGACAGTAAATCAAGAAATGATCATAAGTATTTATAGCATCGATATTTAACACTACAAAACAATAAAAGGAACGTC
GCATAGACATCATGTAAATTGAACGCTGATGAAGTCACCAACAATCATCATCGACCAAATTGTTTAATTTGGAAGGTTAAAGTTCAGATCTTGATCTTTC
TTTGTCCAATACATTTTGAGAAATTAAATCCGTAATAAAATAAATAGAGACAACAACAAACTAAACATTATTCCCATTCAATTTTTCTGCTCATCTTATG
AAGTTGATCCCAGATTACAACAACAAAGTCTTATTCGAATTACTAGACCCAATAGAAGACTCAAAGCAACTAGATCCCCGATAACCCAGAAGGATCGAAA
TTATTTTGGTCTATCCCTCCCTCTTTCAATCCCTTCTACTCAAATTGAGCCTATGAATACCCACACCAAATTAAGCTATATAACTGGTTCCTTGCAACGC
AGAGATCTAAAAGCACAATGAATTTAAATGAAACTAGCAAAGCATTAACACTAATTCAACATAGATTCTGTCAAAAGAAAACTTTAGAAAACTTCAAACA
GTTATTAATCTTACAATACACAGAGTTCATGTAAACATGACCATAATCCCCACACAATTGAATCAATCAAAGACTCAGATCCATTCATTAACACATATCA
AGCTAGGACAACATTATAAACAACAAACCCATTAATCTAAAAACATGGATTCTTCCATGAG