Detailed information on CNT30174424


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8W3Y4|METK_PHALU, E-value = 3e-117

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522642Vigna angularisSetaria italica48.2225.3981.38392forward
CNT30549907Vigna angularisIpomoea triloba26.4540.0484.65215forward
CNT30266655Vigna angularisChenopodium quinoa51.9137.5483.89422forward
CNT30381524Vigna angularisManihot esculenta37.1536.5283.11302forward
CNT30194995Vigna angularisPisum sativum38.8733.1984.18316forward
CNT30495282Vigna angularisOlea europaea4621.2481.02374forward
CNT30561874Vigna angularisActinidia chinensis34.9332.283.45284forward
CNT3086110Vigna angularisVigna radiata41.3330.0598.81336forward
CNT30174161Vigna angularisTrifolium pratense47.4848.9283.94386forward
CNT30144304Vigna angularisMedicago truncatula31.9840.4486.15260forward
CNT30310308Vigna angularisCamelina sativa20.5472.2980.24167forward
CNT30471855Vigna angularisSaccharum spontaneum58.0651.382.63472forward
CNT30650282Vigna angularisRosa chinensis50.4334.883.9410forward
CNT30686785Vigna angularisTriticum urartu42.9334.5582.23349forward
CNT30368076Vigna angularisSorghum bicolor49.236.7383400forward
CNT30597062Vigna angularisOryza meridionalis463482.09374forward
CNT30355133Vigna angularisLactuca sativa24.2322.5180.2197forward
CNT3035650Vigna angularisCucumis melo50.830.6482.81413forward
CNT30148817Vigna angularisBrachypodium distachyon57.0740.1483.19464forward
CNT30101810Vigna angularisOryza rufipogon56.3318.0781.88458forward
CNT30116702Vigna angularisOryza nivara39.7331.4582.35323forward
CNT30725315Vigna angularisLupinus angustifolius32.7226.4490.6266forward

Expression of CNT30174424

Peptides detected in this lncRNA

>peptide 1 (89 aa)
TARGVQVENGLLIKVLLGNHGLDHVLFQISSNFIIRDSLVMLCGDEHGVDTNWNHGTLVIVILNSHLGLAIRSEPRAGTVLPNLSETSP*

>peptide 2 (63 aa)
MLALVVISPKTMTKLVLVHVSQATLLSGSCSRQASRTASEIWSQSLSGCPSFTDSEVNRNVSAI

>peptide 3 (61 aa)
KRPEGFKWKMVFSSRYFSGITGLITCSFRSAAISSFVTVSSCCVEMSTVWTRTGTMAPLSL*

>peptide 4 (38 aa)
MSHKQPCSLDLAQGRRQEQHRRFGRRACLGVPRSRTRR*

>peptide 5 (31 aa)
MFTRTLQLSASSPTSSEMKPMFLQVSRTIFS*

Sequence

>CNT30174424
AAACGGCCAGAGGGGTTCAAGTGGAAAATGGTCTTCTCATCAAGGTACTTCTCGGGAATCACGGGCTTGATCACGTGCTCTTTCAGATCAGCAGCAATTT
CATCATTCGTGACAGTCTCGTCATGTTGTGTGGAGATGAGCACGGTGTGGACACGAACTGGAACCATGGCACCCTTGTCATTGTAATACTCAACAGTCAC
TTGGGTCTTGCCATCAGGTCTGAGCCAAGGGCAGGTACCGTTCTTCCGAACCTCAGTGAGACGAGCCCCTAGTTTGGTTGCGAGGACGTGGCTCAAGGGC
ATCAATTCAGGGGTCTGAGCCAAGGGCAGGTACCGTTCTTCCGAACCTCAGTGAGACGAGCCCCTAGTTTGGTTGCGAGGACGTGGCTCAAGGGCATCAA
TTCAGGGGTCTCGTCGGTGGCATAGCCGAACATGTGACCCTGGTCGCCGGCACCGATTTCTTCAGGTCTTTTGGTGAGGTGGCCATGCACGCCCTGGGCA
ATATCAGGACTCTGCTGCTCAATGTTCACAAGGACCTTGCAGTTGTCGGCATCAAGTCCCACATCGTCTGAGATGAAGCCGATGTTCCTGCAGGTGTCAC
GCACGATCTTCTCGTAGTCAATGTTGGCCTTGGTGGTGATTTCTCCGAAGACCATGACCAAGTTGGTTTTGGTGCATGTCTCACAAGCAACCTTGCTCTC
TGGATCTTGCTCAAGGCAGGCGTCAAGAACAGCATCGGAGATTTGGTCGCAGAGCTTGTCTGGGTGTCCCTCGTTCACGGACTCGGAGGTAAACAGAAAT
GTCTCTGCCATCT