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Detailed information on CNT30266655


BLAST search results

BLAST vs Swiss-Prot:
sp|P31156|METK2_PETCR, E-value = 4e-36

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673492Chenopodium quinoaSetaria viridis36.3941.9985.82409forward
CNT30521128Chenopodium quinoaSetaria italica14.7722.6887.95166forward
CNT30549907Chenopodium quinoaIpomoea triloba23.6749.5384.96266forward
CNT30515028Chenopodium quinoaJuglans regia26.5135.184.56298forward
CNT30374815Chenopodium quinoaArabidopsis thaliana17.5347.782.23197forward
CNT30402686Chenopodium quinoaBeta vulgaris32.5660.792.08366forward
CNT30194995Chenopodium quinoaPisum sativum27.9432.9884.71314forward
CNT30495282Chenopodium quinoaOlea europaea35.9422.9483.42404forward
CNT3047443Chenopodium quinoaPrunus dulcis23.9322.5586.25269forward
CNT30158121Chenopodium quinoaPistacia vera25.4445.7684.97286forward
CNT3090332Chenopodium quinoaSolanum tuberosum32.4756.1588.49365forward
CNT30225130Chenopodium quinoaHordeum vulgare9.1624.4187.38103forward
CNT30561874Chenopodium quinoaActinidia chinensis26.4233.6785.86297forward
CNT3086110Chenopodium quinoaVigna radiata26.626.7483.95299forward
CNT30508429Chenopodium quinoaSolanum lycopersicum9.0741.388.24102forward
CNT30174161Chenopodium quinoaTrifolium pratense34.3448.9283.16386forward
CNT30144438Chenopodium quinoaMedicago truncatula26.661.1584.28299forward
CNT30662024Chenopodium quinoaTriticum dicoccoides15.4834.2586.21174forward
CNT3059692Chenopodium quinoaArabidopsis lyrata7.6529.7683.7286forward
CNT3082721Chenopodium quinoaBrassica juncea14.0654.6782.91158forward
CNT30471855Chenopodium quinoaSaccharum spontaneum40.935086.96460forward
CNT30212612Chenopodium quinoaHelianthus annuus19.1389.2184.19215forward
CNT30624603Chenopodium quinoaDaucus carota24.9142.4285.71280forward
CNT30597062Chenopodium quinoaOryza meridionalis33.0133.7384.64371forward
CNT30429132Chenopodium quinoaPapaver somniferum38.8827.5581.92437forward
CNT30571189Chenopodium quinoaVitis vinifera24.0243.8388.15270forward
CNT3022500Chenopodium quinoaPopulus trichocarpa28.1147.1686.71316forward
CNT3035650Chenopodium quinoaCucumis melo36.4830.4285.85410forward
CNT30148817Chenopodium quinoaBrachypodium distachyon39.8638.7583.26448forward
CNT30101810Chenopodium quinoaOryza rufipogon39.1517.3685.23440forward
CNT30116702Chenopodium quinoaOryza nivara30.0732.9183.14338forward
CNT30594307Chenopodium quinoaEragrostis curvula6.3220.2387.3271forward
CNT30174424Chenopodium quinoaVigna angularis37.5451.9183.89422forward
CNT30551132Chenopodium quinoaOryza brachyantha9.0726.4286.27102forward

Expression of CNT30266655

Peptides detected in this lncRNA

>peptide 1 (76 aa)
MQLFYKHNAAILLLTKPPNNHISVSPTINLPANKEIEKERETKKTLILWPIQKHFIYSFWLESSCSLWRRSGHLLY*

>peptide 2 (31 aa)
QEDGEIIFVTQIFHNYYQRAHITFFRLLLGS*

>peptide 3 (31 aa)
MYTKTLQLSASRPTSADTNPMLRHVCRTIFS*

>peptide 4 (30 aa)
MTKLVFVQVSQATLLSGSCSRQASSTASEI*

Sequence

>CNT30266655
TCAAGAAGACGGTGAAATTATTTTTGTAACGCAAATATTTCATAACTACTATCAACGAGCACACATTACATTTTTTCGGTTGCTGCTCGGCAGCTGATCC
CTTTCTAGCACTGTAAAAAAACATACATATGCAGCTCTTTTACAAACATAATGCTGCCATTTTACTACTAACAAAACCTCCCAACAACCACATTTCTGTT
TCTCCAACAATCAACTTACCCGCAAACAAAGAAATAGAAAAAGAAAGGGAAACTAAAAAGACATTAATATTGTGGCCCATACAAAAGCATTTTATATATT
CCTTTTGGTTAGAGAGCAGCTGCAGCCTGTGGAGGAGATCCGGGCACTTGCTTTATTGATCAAAAATATTAATCAATGAATTCATAGACTTCACTCGACT
TCTCCGGTTTAAGCTTGGGGCTTCTCCCACTTGAGGGGCTTGACAGTCTCCCATGTGAAGTCTGCGTCGTCCCTACCGAAGTGTCCGTAGGCGGCGGTCT
TCAAGTACCTGCTGCCACCCTTTAGAAGGTCAAGGTTGATGGCAATCATACCGGGCCTGAAGTCGAAGGTCTCCTTGACAATCTTGAGGATCTCTTTGTC
TGGGATCTTTCCGGTTCCGTAGGTGTCGATGATGATCTTACGGCCGGTAAGACCAGCATCACCATGAGGCGGGCACCAAGCTTGGTGGCAAGGACGTGAC
TGAGGGGCATCAACTCAGGGGTCTCATCGGTGGCATACCCAAACATGTGACCTTGGTCACCAGCACCAATCTCCTCGGGGCGTTTGGTAAGGTGACCGTG
GACACCCTGGGCGATATCAGGGCTCTGCTGCTCAATGTATACCAAGACCTTGCAGTTGTCAGCATCAAGACCCACATCGGCAGACACAAACCCAATGTTG
CGGCATGTCTGTCGGACAATCTTCTCGTAGTCTACATTAGCCTTGGTGGTGATCTCACCAAAGACCATGACCAAGTTGGTCTTTGTGCAGGTCTCACAAG
CAACCTTGCTCTCGGGGTCTTGCTCAAGGCAAGCATCAAGCACTGCATCAGAGATCTGATCACATAGCTTGTCTGGGTGTCCCTCGTTCACGGATTCGGA
GGTGAATAGGAAGGTGTCGACTGC