SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 3672 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Additional notes
CNT30101546 Oryza rufipogon 4:5839584-5840909 (+) noncoding (-0.0786432)- 73 2.82 2Conserved counterparts: CNT30694650
CNT30101543 Oryza rufipogon 4:22458560-22460342 (+) noncoding (-0.036864)- 61 4.2 2Conserved counterparts: CNT30693830
CNT30101542 Oryza rufipogon 4:27429494-27431280 (+) noncoding (-0.0229376)- 75 7.85 2Conserved counterparts: CNT30690399
CNT30101539 Oryza rufipogon 4:5835745-5837526 (+) coding (0.225)1e-63 (sp|P10978|POLX_TOBAC) 98 17.99 1Conserved counterparts: CNT30577642
CNT30101538 Oryza rufipogon 4:5214921-5216092 (-) noncoding (-0.045056)- 51 7.13 1Conserved counterparts: CNT30576175
CNT30101536 Oryza rufipogon 4:8596614-8603459 (-) noncoding (-0.008192)- 62 6.92 2
CNT30101535 Oryza rufipogon 4:16627200-16628571 (-) noncoding (-0.08192)- 85 19.44 2
CNT30101534 Oryza rufipogon 4:3402127-3402613 (+) noncoding (-0.06144)- 75 2.44 3
CNT30101533 Oryza rufipogon 4:4908335-4911315 (+) coding (0.174)- 80 6.32 2Conserved counterparts: CNT30575554
CNT30101532 Oryza rufipogon 4:24068927-24071105 (+) coding (0.239)- 63 8.95 1
CNT30101530 Oryza rufipogon 4:20738326-20739057 (+) noncoding (-0.0319488)5e-21 (sp|P23666|GUN2_PERAE) 85 65.93 2
CNT30101529 Oryza rufipogon 4:11708066-11708320 (-) noncoding (-0.185549)8e-46 (sp|Q7XTG7|HCAR_ORYSJ) 41 1.88 1Conserved counterparts: CNT30576171
CNT30101527 Oryza rufipogon 4:27430500-27431158 (-) noncoding (-0.086016)- 54 1.33 2
CNT30101525 Oryza rufipogon 4:29214890-29221000 (+) coding (0.609)2e-29 (sp|Q7XR61|MTK1_ORYSJ) 81 6.07 2Conserved counterparts: CNT30595702
CNT30101522 Oryza rufipogon 4:26508171-26508588 (+) noncoding (-0.0004096)- 48 55.3 2
CNT30101521 Oryza rufipogon 4:11391676-11393876 (+) noncoding (-0.118784)- 68 4.93 2
CNT30101520 Oryza rufipogon 4:9066021-9066737 (-) noncoding (-0.0004096)- - 10.37 2
CNT30101519 Oryza rufipogon 4:18444012-18444991 (-) coding (0.461)2e-104 (sp|Q7XV13|LOX5_ORYSJ) 54 0.94 2
CNT30101518 Oryza rufipogon 4:12417489-12426955 (-) noncoding (-0.0004096)3e-29 (sp|Q7XT99|AKR2_ORYSJ) - 1.83 2Conserved counterparts: CNT30530112, CNT30603989, CNT30692748
CNT30101516 Oryza rufipogon 4:22747547-22748010 (-) coding (0.128)- 56 25.79 1
CNT30101514 Oryza rufipogon 4:15217494-15218110 (-) noncoding (-0.0651264)- 42 2.4 2Conserved counterparts: CNT30132470, CNT30576226, CNT30604034, CNT30692798
CNT30101513 Oryza rufipogon 4:4456480-4460168 (+) noncoding (-0.0446464)- 75 0.33 3Conserved counterparts: CNT30576100
CNT30101512 Oryza rufipogon 4:10504226-10504694 (+) noncoding (-0.0299008)- 48 68.5 1
CNT30101510 Oryza rufipogon 4:30018229-30019394 (+) coding (0.349)- 100 406.82 2Conserved counterparts: CNT30576205
CNT30101509 Oryza rufipogon 4:16102692-16102959 (-) noncoding (-0.016384)- 89 17.06 1Conserved counterparts: CNT30576097
CNT30101508 Oryza rufipogon 4:23049431-23049858 (+) coding (0.443)0.000005 (sp|P85955|DRE1_PSEMZ) 87 2.57 2
CNT30101507 Oryza rufipogon 4:14230056-14230872 (-) noncoding (-0.0004096)- 50 15.55 2Conserved counterparts: CNT30578306
CNT30101505 Oryza rufipogon 4:30018229-30019414 (+) coding (0.331)1e-22 (sp|Q9SRN1|NHL2_ARATH) 99 650.46 2Conserved counterparts: CNT30576205
CNT30101504 Oryza rufipogon 4:20922860-20923141 (+) noncoding (-0.0004096)- - 0 2
CNT30101502 Oryza rufipogon 4:4908359-4911315 (+) coding (0.205)- 33 1.7 3Conserved counterparts: CNT30575554
CNT30101501 Oryza rufipogon 4:189409-190872 (+) noncoding (-0.036864)- 61 8.19 2Conserved counterparts: CNT30576146, CNT30604007
CNT30101500 Oryza rufipogon 4:3597522-3597870 (-) noncoding (-0.0004096)- 52 57.48 2
CNT30101499 Oryza rufipogon 4:28052394-28054161 (+) coding (0.181)- 86 3.6 2
CNT30101498 Oryza rufipogon 4:11318956-11319862 (+) noncoding (-0.016384)- 56 14.14 2Conserved counterparts: CNT30571978
CNT30101496 Oryza rufipogon 4:29607864-29609153 (+) coding (0.288)- 61 18.32 1
CNT30101495 Oryza rufipogon 4:28054584-28055386 (+) noncoding (-0.077824)- 38 0.2 2
CNT30101494 Oryza rufipogon 4:1780517-1793179 (+) noncoding (-0.098304)0.000000001 (sp|Q9M8Z7|U80A2_ARATH) 33 100.69 2Conserved counterparts: CNT30692691
CNT30101490 Oryza rufipogon 4:22733910-22741914 (-) noncoding (-0.012288)- 64 30.71 8Conserved counterparts: CNT30575998, CNT30596845
CNT30101489 Oryza rufipogon 4:6746632-6747171 (-) noncoding (-0.0004096)- 33 2.89 2Conserved counterparts: CNT30694181
CNT30101487 Oryza rufipogon 4:23404399-23405214 (-) coding (0.299)- 47 267.26 2Conserved counterparts: CNT30692819
CNT30101485 Oryza rufipogon 4:18818280-18819125 (-) coding (0.124)- 83 9.82 2
CNT30101483 Oryza rufipogon 4:26285842-26297307 (-) noncoding (-0.0585728)- 98 8.43 2Conserved counterparts: CNT30596576
CNT30101481 Oryza rufipogon 4:26799808-26800247 (+) noncoding (-0.172032)- 50 35.94 2Conserved counterparts: CNT30576227, CNT30603976
CNT30101480 Oryza rufipogon 4:8116221-8119184 (-) noncoding (-0.034816)- 68 3.13 3Conserved counterparts: CNT30574816, CNT30693056
CNT30101479 Oryza rufipogon 4:30196325-30197438 (+) coding (0.224)4e-61 (sp|Q01548|PER2_HORVU) 75 579.43 2Conserved counterparts: CNT30693017
CNT30101475 Oryza rufipogon 4:6208154-6208592 (+) noncoding (-0.008192)- - 57.48 1
CNT30101474 Oryza rufipogon 4:14850733-14851697 (-) coding (0.106)- 74 2.6 2
CNT30101473 Oryza rufipogon 4:12417489-12417879 (-) noncoding (-0.0004096)- 35 17.37 2Conserved counterparts: CNT30603989, CNT30692870
CNT30101472 Oryza rufipogon 4:27039856-27040633 (+) coding (0.21)1e-30 (sp|Q7Y214|GTE7_ARATH) 98 0.35 2Conserved counterparts: CNT30576236
CNT30101469 Oryza rufipogon 4:1864307-1865014 (+) noncoding (-0.049152)- 67 4.23 2Conserved counterparts: CNT30596178