Detailed information on CNT30596576


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT302507Oryza meridionalisZea mays38.2116.6783.9581forward
CNT3068259Oryza meridionalisLeersia perrieri73.1115.4888.39155reverse complement
CNT30550760Oryza meridionalisOryza brachyantha7514.0286.16159reverse complement

Expression of CNT30596576

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MANPFKDAYLCNGQARNDRCSYHVSSQLYKTEFDN*

>peptide 2 (69 aa)
WRILLKMPTYAMDKQEMIVAATMCLHNFIRQNSTTDKYFRRCDRDPNYVPTIPTRYARYVVSQNASDTST

Sequence

>CNT30596576
ATGGCGAATCCTTTTAAAGATGCCTACCTATGCAATGGACAAGCAAGAAATGATCGTTGCAGCTACCATGTGTCTTCACAACTTTATAAGACAGAATTCG
ACAACTGACAAGTATTTTCGTAGGTGTGATCGAGATCCAAATTATGTCCCAACTATACCAACAAGATATGCAAGATATGTTGTTTCCCAAAATGCATCAG
ATACCTCTACTC