Detailed information on CNT30604034


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692798Oryza punctataOryza sativa68.7210094.12323forward
CNT30464818Oryza punctataSaccharum spontaneum63.1913.8382.15297forward
CNT30132470Oryza punctataLolium perenne81.4940.4981.2383forward
CNT303809Oryza punctataZea mays27.4539.5783.72129forward
CNT3067359Oryza punctataLeersia perrieri54.0459.9194.09254forward
CNT30352097Oryza punctataEragrostis tef34.4738.8587.04162forward
CNT30101514Oryza punctataOryza rufipogon101.2887.3494.75476forward
CNT30576226Oryza punctataOryza barthii101.0689.9694.74475forward
CNT30116488Oryza punctataOryza nivara101.2884.194.96476forward

Expression of CNT30604034

Peptides detected in this lncRNA

>peptide 1 (34 aa)
SHHFISDINLSYSASAPYSGCSMLEGGGGGGGAL*

Sequence

>CNT30604034
GCTCACATCACTTCATCTCTGACATAAACTTATCATACTCTGCATCAGCGCCATATTCAGGCTGCTCAATGCTGGAAGGTGGTGGTGGTGGAGGCGGTGC
ATTGTGAGTGGCCCAAGGTGCACTTGCAATGCTCTGTGAGTGATCAGCAGTAGGTGGTGGTGGAGGTGGTGCACTGTGAGTTGCCCAGGGTGCATTTGCG
ATGCTCTGCGACGGATCAGCACCAGAAGGTGGTGGAGGTGGTGGTGGCTGAACTGGTGTCACCGATGGATAATAAGAAGCATAACCATAAGGAGGTGGAG
GGTACATAGGTGGCGCATTTGGTGCACCGGAAGTTCCATATACTGGAGCTGGGACAGGCTGAGTAGGTGCACCAGAACTTGGTGGTGTTACACCAGGAGG
ATAGTTCTGTGCCCCATCAGTTGAGGGAGCAGTGCCTGGTGGAGGAATTGGAGCTGGTGGTGGTGGATAC