Detailed information on CNT30576226


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692798Oryza barthiiOryza sativa61.17100100323forward
CNT30132470Oryza barthiiLolium perenne94.752.8581500forward
CNT303809Oryza barthiiZea mays25.3841.182.09134forward
CNT3067359Oryza barthiiLeersia perrieri48.1159.9194.09254forward
CNT30352097Oryza barthiiEragrostis tef20.6426.1491.74109forward
CNT30101514Oryza barthiiOryza rufipogon96.2193.2199.41508forward
CNT30116488Oryza barthiiOryza nivara97.1690.6499.61513forward
CNT30604034Oryza barthiiOryza punctata89.96101.0694.74475forward

Expression of CNT30576226

Peptides detected in this lncRNA

>peptide 1 (48 aa)
LFPLLEELLHLASHHFISDINLSYSASAPYVAGGCSMLEGGGGGGGAL*

Sequence

>CNT30576226
CCTTTTTCCACTGTTGGAAGAATTGCTTCATCTTGCCTCACATCACTTCATCTCTGACATAAACTTATCATACTCTGCATCAGCACCATATGTAGCAGGA
GGCTGCTCAATGCTGGAAGGTGGTGGTGGTGGAGGCGGTGCATTGTGAGTGGCCCAAGGTGCACTTGCAATGCTCTGTGAGTGATCAGCAGTAGCTGGTG
GTGGAGGTGGTGCACTGTGAGTTGCCCACGGTGCATTTGCAAGGCTCTGCGAGGGATCAGCGCCAGCAGGTGGTGGAGGTGGTGGCGGCTGAACTGGTGT
CACCGATGGATAATAAGAGGCATAACCATAAGGAGGTGGAGGGTACATAGGTGGCGCATTTGGTGCGCCGGAAGTTCCATATACTGGAGCTGGGACAGGC
TGAGTAGGTGCACCAGAACTTGGTGGTGTTACACCAGGAGGGTAGTTCTGCGCCCCATCAGTTGATGGAGCGGTGCCTGGTGGAGGGATTGGAGCTGGTG
GTGGTGCATACTGCACACCATATGGAGG