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Detailed information on CNT30576236

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30101472	Oryza barthii	Oryza rufipogon	81.39	62.48	99.77	433	forward

Expression of CNT30576236

Peptides detected in this lncRNA

>peptide 1 (39 aa)
ALLNVSRTSAAKSSCEGYLPAARFALTVPRSMGHLMTAW*

>peptide 2 (96 aa)
MLRLSFRSFARICSQRFRIAALSFAGGVGRSRRGGPAARGPRGEPSPPAAAPRSLTAAASWPSRWRAAGEGGWDRNWGPRARAGHGSPPTGGGGGG*

Sequence

>CNT30576236
GCGTTGCTGAACGTGAGCCGGACGTCGGCGGCGAAGTCGTCGTGTGAGGGGTACCTTCCGGCGGCGAGGTTCGCCCTCACCGTGCCGAGATCCATGGGGC
ACTTGATGACTGCGTGGTAGTCGTGGAGCCCGAGGCGGTCGACCTCGACGGGGGCGTTGAACCAGATGCTCCGCTTGTCCTTCCGCAGCTTCGCCAGGAT
CTGCTCGCAACGCTTCCGCATCGCCGCCCTGAGCTTCGCCGGCGGCGTGGGGAGGTCCCGGCGAGGCGGTCCCGCAGCGCGCGGGCCTCGCGGTGAGCCA
TCGCCCCCGGCCGCAGCGCCACGTAGCTTGACGGCGGCGGCCTCGTGGCCGAGCCGTTGGCGCGCTGCTGGAGAGGGTGGTTGGGATCGGAATTGGGGGC
CACGGGCGCGAGCGGGGCACGGGTCTCCCCCCACTGGTGGTGGTGGTGGTGGTTAGCCCCGCCCCGGCCGGCGAGCAGGGCGGAGGCCATCACCGTCGCC
GTCGCCGGCGAGGGTTTCGCGTGCTGCTGCTG