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Detailed information on CNT30595702


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30105825Oryza meridionalisOryza longistaminata20.9826.5591.13124forward
CNT30116389Oryza meridionalisOryza nivara20.1411.7185.71119reverse complement

Expression of CNT30595702

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MESLLLPSDLIYGGVLEIKSDQPICDVKKTIIKKVQFALVKILCETISVPLL*

>peptide 2 (29 aa)
MTHRYKFKDRPALNSKGKQTRIPHWTCLF*

Sequence

>CNT30595702
ATCCAAGAGGGGATGTGTCGATTTGGGACCTAGATGATACACTTTGACAAGTTCTAGGATCTGGATATGTATTTTGAGAGTTTAGGGACATAGATGACAC
ATCGCTACAAGTTTAAGGACCGCCCGGCACTTAACTCAAAAGGAAAACAAACAAGGATTCCACATTGGACATGTCTATTTTGAAGCATGTAAAAAGACAA
ACTTCATAACACCGTCCTTTTGGGCTGGAAGAGAAGTTACTGTACCCTTAAACTTTTGAAAGGGATATGGGTGCGGATGGAAAGTTTGCTACTTCCTTCA
GATCTCATTTATGGAGGTGTGTTGGAAATAAAATCAGACCAGCCTATCTGTGATGTCAAGAAAACAATCATCAAGAAAGTGCAATTTGCACTAGTGAAAA
TTTTATGTGAGACTATTAGTGTTCCTTTGCTCTGAGCAAACGTGTCAAATTCATGCCAATTTTGTTTTTCTGTAGAATACCTGTATAGCTGCGCTGCACA
AAACATTGCTAGTTGTTGCTTGATCATGTAATGCAAGAGTACTCTAGTTCCCAGCTGATAGGATTTTGCTTATTAGCTTGCTGTATTTCAT