Detailed information on CNT30692798


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30464818Oryza sativaSaccharum spontaneum53.878.182.18174forward
CNT30132470Oryza sativaLolium perenne70.282481.06227forward
CNT3067359Oryza sativaLeersia perrieri37.4628.5495.04121forward
CNT30101514Oryza sativaOryza rufipogon10059.2799.69323forward
CNT30576226Oryza sativaOryza barthii10061.17100323forward
CNT30116488Oryza sativaOryza nivara10057.07100323forward
CNT30604034Oryza sativaOryza punctata10068.7294.12323forward

Expression of CNT30692798

Peptides detected in this lncRNA

>peptide 1 (31 aa)
SDINLSYSASAPYVAGGCSMLEGGGGGGGAL*

Sequence

>CNT30692798
TCTCTGACATAAACTTATCATACTCTGCATCAGCACCATATGTAGCAGGAGGCTGCTCAATGCTGGAAGGTGGTGGTGGTGGAGGCGGTGCATTGTGAGT
GGCCCAAGGTGCACTTGCAATGCTCTGTGAGTGATCAGCAGTAGCTGGTGGTGGAGGTGGTGCACTGTGAGTTGCCCACGGTGCATTTGCAAGGCTCTGC
GAGGGATCAGCGCCAGCAGGTGGTGGAGGTGGTGGCGGCTGAACTGGTGTCACCGATGGATAATAAGAGGCATAACCATAAGGAGGTGGAGGGTACATAG
GTGGCGCATTTGGTGCGCCGGAA