Detailed information on CNT30692691


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9M8Z7|U80A2_ARATH, E-value = 7e-10

BLAST vs NONCODE:
NONORUT004123, E-value = 3e-170

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30289051Oryza sativaTriticum aestivum24.2933.3389.6177forward
CNT30109834Oryza sativaOryza longistaminata90.8553.0495.14288forward
CNT30101494Oryza sativaOryza rufipogon95.2786.29100302forward

Expression of CNT30692691

Peptides detected in this lncRNA

>peptide 1 (78 aa)
KGKKIKDNKAHSLQEIRSPDPCRDVQNSLLSTGRNGILCVIASLSPMSNQDIYLQDLRIPGSWMSAEVLFPLLLKVDV*

Sequence

>CNT30692691
CAAAAGGGAAAAAAATAAAAGATAATAAAGCACACTCTCTCCAGGAAATCCGTTCTCCTGATCCTTGCAGGGATGTTCAAAATTCTCTTCTTTCAACAGG
GAGAAATGGCATTCTTTGTGTAATTGCCTCACTGTCACCTATGAGCAACCAAGACATTTACTTACAGGACCTAAGAATTCCAGGAAGCTGGATGTCTGCT
GAGGTGCTGTTTCCTCTGCTCTTGAAGGTAGATGTCTGAGGAATGCCCTGACTGCACCTGACACACCATCTTCAGATTCCATGGCCTTGGCAAGCTCCAC
GGCATTGTCTTTCACCT