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Detailed information on CNT30692870


BLAST search results

BLAST vs Swiss-Prot:
sp|Q7XT99|AKR2_ORYSJ, E-value = 1e-61

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30676378Oryza sativaSetaria viridis21.435.6385.71119forward
CNT30501551Oryza sativaCoffea canephora18.7123.1182.69104forward
CNT30192307Oryza sativaSecale cereale58.2739.5183.02324forward
CNT30472864Oryza sativaSaccharum spontaneum24.122.6481.34134forward
CNT30133477Oryza sativaLolium perenne34.8996.0487.63194forward
CNT30370023Oryza sativaOryza glumipatula25.3657.7998.58141forward
CNT30120862Oryza sativaCitrus clementina24.6425.1881.02137forward
CNT30603989Oryza sativaOryza punctata38.6798.6295.81215forward

Expression of CNT30692870

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MKTFTLLSKTTMEGSQNPSKCRPSEHSGHLEQHLCWHRTQVQSFPQG*

Sequence

>CNT30692870
CTCAGAACTTTATTTATTATTCGCACACGTACTGCGCACAAACTAATAAAACCACACTTTACAACACCACTAGCTAGGTTTTAGACACAAACAAGCATAA
GCGATGGTTTAACAAGAGCGAGCAACGCGTCTGATACAATGAACACTTATACAAAATCTGGTGTGTGCTCTGCCATTTGAGCTAAATTTGAACCGGGATT
TTGTATTTGAACATATGAAAACGTTTACTCTGCTTTCCAAGACGACAATGGAGGGGTCTCAGAATCCTTCCAAGTGCCGGCCGTCTGAGCATAGCGGTCA
CCTTGAACAACATCTGTGCTGGCATAGGACTCAAGTTCAGTCATTTCCCCAGGGGTGAGCTTCACAGATAGAGCTGCTACATTTTGATTGAAATTCTCGA
TTTTTGTTGTCCCAGGTATGGGGCATACATCGCTTCCCTGATGATGGACCCAGGCCAATGCGAGCTGTGACGGTGTGCATCCTTTTCTGGCTGCCATTGC
GTTAACACGCTCAAATATTTCAGCATTCTTCTCAAGATTCTCTTGTTGAAATCTAG