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Detailed information on CNT30692819


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30101487Oryza sativaOryza rufipogon64.7576.1398.82338forward

Expression of CNT30692819

Peptides detected in this lncRNA

>peptide 1 (58 aa)
MQRKCNYASVHRRRRREGRGRRRRAFAARAAAGIGRREEEEVDGQEKHEDLGCHGAYP*

>peptide 2 (76 aa)
MHACTYKCSVNATMQACTGGGGGRAGGGGVGHLPHAQPQALAVVKKRRLMAKRNTRILDAMELILKGIYGYLLRPV*

>peptide 3 (33 aa)
MQLCKRAQAAAAGGPGAAASGICRTRSRRHWPS*

>peptide 4 (38 aa)
RILPEIDGFVEFSPKDRTIRKYINDSQLSNSCYYKYTI*

Sequence

>CNT30692819
AAGAATATTACCTGAGATAGATGGCTTTGTTGAATTTTCTCCAAAAGACAGGACAATAAGAAAATATATTAACGATTCACAACTTTCAAATTCGTGCTAT
TACAAATACACGATATAATGACTCCAACTTATTGCAACCTTTGTAAACAGAACAAACGATCAAACCCGTAGCAAATTTATGAAACAAATACACACCAATA
AGTGTACACTCGATCGACTGGAACGGCTCTAGTTCTGCAGAACCGCGGTGGAACGTTTGCGACAGAAGATCAACGGTGGTATAGCTATATATGCATGCAT
GCACATATAAATGCAGCGTAAATGCAACTATGCAAGCGTGCACAGGCGGCGGCGGCGGGAGGGCCGGGGGCGGCGGCGTCGGGCATTTGCCGCACGCGCA
GCCGCAGGCATTGGCCGTCGTGAAGAAGAGGAGGTTGATGGCCAAGAGAAACACGAGGATCTTGGATGCCATGGAGCTTATCCTTAAGGGTATATATGGC
TATTTGCTAAGGCCGGTGTAGG