Detailed information on CNT30603989


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692870Oryza punctataOryza sativa98.6238.6795.81215forward
CNT30676378Oryza punctataSetaria viridis42.227.5490.2292forward
CNT30703861Oryza punctataQuercus lobata49.0841.883.18107forward
CNT30500052Oryza punctataCoffea canephora27.0622.5286.4459forward
CNT30492602Oryza punctataOlea europaea29.829.7286.1565forward
CNT30192114Oryza punctataSecale cereale76.1520.3989.16166forward
CNT30587122Oryza punctataMusa acuminata42.213.2282.6192forward
CNT30472864Oryza punctataSaccharum spontaneum61.4722.6482.09134forward
CNT30133477Oryza punctataLolium perenne77.9884.1690.59170forward
CNT30370023Oryza punctataOryza glumipatula66.0659.0297.92144forward
CNT30101518Oryza punctataOryza rufipogon66.9760.3397.95146forward

Expression of CNT30603989

Peptides detected in this lncRNA

>peptide 1 (32 aa)
ISSGVSFTDNAATFWLKFSIFVVPGMGHTSLP*

Sequence

>CNT30603989
CATTTCCTCAGGGGTGAGCTTCACAGATAATGCTGCAACGTTTTGGTTGAAATTCTCGATTTTTGTTGTCCCAGGTATGGGGCATACATCGCTTCCCTGA
TGATGGACCCAGGCCAATGCGAGTTGTGACGGTGTGCATCCTTTTCTGGCTGCCATTGCGTTAACATGCTCAAATATTTCAGCATTCTTCTCAAGATTCT
CTGGTTGAAATCTAGGAA