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Detailed information on CNT30694181


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT002197, E-value = 1e-128

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30369559Oryza sativaOryza glumipatula26.2853.9991.44257forward
CNT30576966Oryza sativaOryza barthii28.2215.6392.39276reverse complement
CNT30115470Oryza sativaOryza nivara28.0226.1793.07274forward

Expression of CNT30694181

Peptides detected in this lncRNA

>peptide 1 (42 aa)
GYLIRIELVFEFISKTEFLIFPDRFLAGGVRSLQSKAINRTP*

>peptide 2 (39 aa)
WVSYPNRTRFRVYLQNRVFDFPGSISCGRSPISSIQGYK*

>peptide 3 (31 aa)
MSTLSFVYPGRSWTGILMHILLGILFGNFWA*

>peptide 4 (36 aa)
MSTSMCQMKVSPRSRLRPCRRGCLWSGVPAAVLVKA*

Sequence

>CNT30694181
TGGGTATCTTATCCGAATCGAACTCGTTTTCGAGTTTATCTCCAAAACCGAGTTTTTGATTTTCCCGGATCGATTTCTTGCGGGAGGAGTCCGATCTCTT
CAATCCAAGGCTATAAATAGGACCCCCTAGTCCTCCTCTTTCGTTTGCCCCCTCTCCCGTGGTCTCCCGTGCCTCGTAGCGCCGCCGCCACGTGCTCCAC
CCCGCCGTCGTCGCCGGCCGATCTCCATCCGCGTCGCGCCGCCGCCTCCGTCGTCGCCGCCGGTCGCCGTCACCGCCGTAAGGTGCGCCGAGGTGTGGAG
AAGCTCGGCCGCTCTCTCCCCGCTGTCGCCGGTCACCGGAGCCCCGTCGCCGCCGTCGACCGAAGCCGTGCCGCCGCTAGACCTCGTCGCCGGCCGTCGT
CGTTCGTCGTTTGGTTCGAGGCTTGTCGTTTCCGTCGTTGCGAAGGTTCGTGAGTGCGCCGGAAGTATTCAAGAAGATTAATTGAAGACCGATTATTGCA
AGTTGAAGAAAAAGGATTCAGAAGGAGAAGACGTTTGGCTTATACCCCAGTTGAGCTGCCTGTGGGAGTGGAGCCGGAGCTTCGCTAGATTTTATTTTTC
CGCTGCAGTTTTCTTCATGAGCACGAGTATGTGTCAGATGAAGGTTTCTCCGAGGAGTAGGCTTCGTCCGTGCCGTCGAGGATGCCTGTGGAGTGGTGTT
CCCGCTGCAGTTCTAGTCAAGGCTTAGCTCCTGTTGTCTTTCGTTTTTCCGCTGCATTTACGTAAGACTTTTATGATGTTTGTAAGACGTGGATCTGAAT
GTCAACATTGTCATTTGTGTACCCCGGCCGGTCCTGGACGGGCATTTTAATGCACATTCTGCTTGGAATTCTATTCGGGAATTTCTGGGCATGACAATAC
TGTCCTTGAATAATTGTGGTACCCTCTGTTTGTATCCTTAAGAATGGTTTTGAGTACTTCACTTGTGCTCGATTGGGC