Detailed information on CNT30530112


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30699837Eucalyptus grandisQuercus lobata19.5425.1188.1459forward
CNT30566887Eucalyptus grandisActinidia chinensis5049.0388.74151forward
CNT30129170Eucalyptus grandisCorymbia citriodora95.781.1887.89289forward
CNT30570768Eucalyptus grandisVitis vinifera66.8940.6483.66202forward
CNT3064332Eucalyptus grandisSelaginella moellendorffii20.8617.9587.363forward

Expression of CNT30530112

Peptides detected in this lncRNA

>peptide 1 (99 aa)
LAEEDFVGVRAVDVGGVEEGDARADGVVDECDHVGFGLGRAVAGGHAHAAQPLRGHLEALRTQPDPPQRRRRHRRSRLARGRCREERTEKRQFESSPARS

>peptide 2 (32 aa)
MPMQPSPCADTSRPCEPSLILLSVDAAIAAVV*

>peptide 3 (29 aa)
MSEVSRKVTPEPTAWWMSAIMSGSGLGGP*

Sequence

>CNT30530112
CCTTGCCGAGGAGGATTTCGTTGGTGTGAGGGCCGTAGATGTCGGAGGTGTCGAGGAAGGTGACGCCAGAGCCGACGGCGTGGTGGATGAGTGCGATCAT
GTCGGGTTCGGGCTTGGGAGGGCCGTAGCCGGCGGACATGCCCATGCAGCCCAGCCCCTGCGCGGACACCTCGAGGCCCTGCGAACCCAGCCTGATCCTC
CTCAGCGTCGACGCCGCCATCGCCGCAGTCGTCTAGCTCGAGGTCGATGCAGAGAAGAGAGAACGGAGAAGAGACAGTTCGAGAGCTCTCCCGCCCGCTC
AC