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Detailed information on CNT30317789


BLAST search results

BLAST vs Swiss-Prot:
sp|P83504|PSBO_BRACM, E-value = 1e-15

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674885Corylus avellanaSetaria viridis45.3225.8483.792forward
CNT30535986Corylus avellanaEucalyptus grandis63.0517.4985.16128forward
CNT30546556Corylus avellanaIpomoea triloba10016.9980.3203forward
CNT30515312Corylus avellanaJuglans regia73.49.5388.59149forward
CNT30700663Corylus avellanaQuercus lobata76.3529.2593.55155forward
CNT30374900Corylus avellanaArabidopsis thaliana40.8914.2484.3483forward
CNT30277684Corylus avellanaChenopodium quinoa70.4415.9683.22143forward
CNT30727931Corylus avellanaCorchorus capsularis10026.1987.68203forward
CNT30379731Corylus avellanaManihot esculenta90.1516.4982.51183forward
CNT30524993Corylus avellanaPhaseolus vulgaris71.9212.7385.62146forward
CNT30710612Corylus avellanaGlycine max86.2116.9682.86175forward
CNT3042430Corylus avellanaPrunus dulcis99.0118.4686.57201forward
CNT30179447Corylus avellanaSecale cereale75.3715.2881.7153forward
CNT30290508Corylus avellanaTriticum aestivum75.3719.9782.35153forward
CNT30221247Corylus avellanaHordeum vulgare45.3217.2684.7892forward
CNT30386162Corylus avellanaTriticum turgidum75.3715.3682.35153forward
CNT30567884Corylus avellanaActinidia chinensis67.496.9586.13137forward
CNT30592119Corylus avellanaMusa acuminata71.9216.1784.25146forward
CNT3086209Corylus avellanaVigna radiata80.311.4582.21163forward
CNT30543261Corylus avellanaBrassica napus98.5237.1182.5200forward
CNT30234321Corylus avellanaBrassica oleracea99.0114.981.59201forward
CNT30508746Corylus avellanaSolanum lycopersicum90.1522.180.33183forward
CNT30147114Corylus avellanaMedicago truncatula86.79.9379.55176forward
CNT30436022Corylus avellanaAegilops tauschii75.3715.582.35153forward
CNT30244672Corylus avellanaAvena sativa71.9219.6584.25146forward
CNT30657716Corylus avellanaTriticum dicoccoides75.3715.8282.35153forward
CNT30259787Corylus avellanaBrassica rapa84.2431.3282.46171forward
CNT30597992Corylus avellanaFraxinus excelsior38.9222.6483.5479forward
CNT3010265Corylus avellanaZea mays83.7423.5880.59170forward
CNT30607994Corylus avellanaGossypium raimondii10023.3983.25203forward
CNT30718209Corylus avellanaMalus domestica golden70.9410.784.72144forward
CNT30626592Corylus avellanaDaucus carota80.318.583.44163forward
CNT30681606Corylus avellanaTriticum urartu75.3718.1782.35153forward
CNT30342712Corylus avellanaEragrostis tef71.9216.7882.88146forward
CNT30477612Corylus avellanaArabidopsis halleri98.5240.1681.5200forward
CNT30621504Corylus avellanaCajanus cajan99.5112.8282.67202forward
CNT30357143Corylus avellanaLactuca sativa73.420.6781.88149forward
CNT30571041Corylus avellanaVitis vinifera34.9819.5687.3271forward
CNT30704474Corylus avellanaPrunus avium87.6823.9684.83178forward
CNT3023343Corylus avellanaPopulus trichocarpa10027.3684.73203forward
CNT30319324Corylus avellanaAsparagus officinalis22.1714.1191.1145forward
CNT3036059Corylus avellanaCucumis melo79.3126.3181.99161forward
CNT30584089Corylus avellanaEchinochloa crusgalli83.7414.3881.76170forward
CNT30557822Corylus avellanaPanicum hallii87.1925.3681.36177forward
CNT30724089Corylus avellanaLupinus angustifolius47.7823.688.6697forward
CNT30115348Corylus avellanaEutrema salsugineum85.2225.6780.35173forward

Expression of CNT30317789

Peptides detected in this lncRNA

>peptide 1 (55 aa)
FLFTLSALTVKEVGSRQSFLALYLPGLKANFSTPPSMVGHWLAVPDPLTSMYVLL*

Sequence

>CNT30317789
ATTCTTGTTCACACTCTCGGCTTTGACGGTGAAAGAAGTGGGCTCTAGGCAGAGCTTCTTGGCATTGTACTTGCCGGGCTTGAAGGCGAATTTTTCCACC
CCGCCGTCAATGGTTGGGCACTGGTTGGCTGTTCCGGATCCCTTGACCTCCATGTATGTCTTGCTCTGAATTTCATCATAGGTTAGCCTCTTTGGAACTC
CTT