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Detailed information on CNT30319324


BLAST search results

BLAST vs Swiss-Prot:
sp|P83504|PSBO_BRACM, E-value = 2e-16

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674637Asparagus officinalisSetaria viridis48.5970.1489.68155forward
CNT30317789Asparagus officinalisCorylus avellana14.1122.1791.1145forward
CNT30547255Asparagus officinalisIpomoea triloba53.9233.0881.98172forward
CNT30377797Asparagus officinalisArabidopsis thaliana39.1849.4182.4125forward
CNT30266710Asparagus officinalisChenopodium quinoa43.8916.3782.14140forward
CNT30727931Asparagus officinalisCorchorus capsularis44.8318.4581.82143forward
CNT30524993Asparagus officinalisPhaseolus vulgaris43.8912.2186.43140forward
CNT3042430Asparagus officinalisPrunus dulcis39.1811.4881.6125forward
CNT30567883Asparagus officinalisActinidia chinensis39.185.881.6125forward
CNT30543261Asparagus officinalisBrassica napus43.8925.9782.86140forward
CNT30238377Asparagus officinalisBrassica oleracea43.8926.0782.86140forward
CNT30259787Asparagus officinalisBrassica rapa42.3224.7381.48135forward
CNT30713316Asparagus officinalisMalus domestica golden39.1813.4181.6125forward
CNT30348024Asparagus officinalisEragrostis tef48.925.2888.46156forward
CNT30368337Asparagus officinalisSorghum bicolor48.5923.3185.81155forward
CNT30584089Asparagus officinalisEchinochloa crusgalli48.5913.1188.39155forward
CNT30557734Asparagus officinalisPanicum hallii42.0119.0389.55134forward

Expression of CNT30319324

Peptides detected in this lncRNA

>peptide 1 (89 aa)
LLEFHGSVGGDLEGALDLVEGVGEAGHEFCGLELGRGVLGDALGLDGEGGGLEAELLHGVGAAVDGRALVGGAGSFDFHVGFALDLVVG*

>peptide 2 (53 aa)
MSFVGWNSGGEFLAMPSALTVKEVGSRQSFFMVSEPPSMVGHWLAVPVPLTSM*

Sequence

>CNT30319324
TCTCCTCGAATTTCACGGCTCCGTCGGAGGAGACCTCGAAGGGGCCCTCGATCTCGTCGAGGGTGTAGGTGAGGCGGGTCATGAGTTTTGTGGGTTGGAA
CTCGGGAGGGGAGTTCTTGGCGATGCCCTCGGCCTTGACGGTGAAGGAGGTGGGCTCGAGGCAGAGCTTCTTCATGGTGTCGGAGCCGCCGTCGATGGTC
GGGCATTGGTTGGCGGTGCCGGTTCCTTTGACTTCCATGTAGGTTTTGCTTTGGATCTCGTCGTAGGTTAGGCGTTTTGGCACGCCCTCGGCGTTGGCTC
CCTGTCGCATAAATGGAAA