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Detailed information on CNT3010265


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SBN6|PSBO_VOLCA, E-value = 4e-37

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674885Zea maysSetaria viridis25.3851.496.72183forward
CNT30317789Zea maysCorylus avellana23.5883.7480.59170forward
CNT30700663Zea maysQuercus lobata17.4823.7781.75126forward
CNT30524993Zea maysPhaseolus vulgaris30.9319.4483.86223forward
CNT30710612Zea maysGlycine max32.4522.6781.62234forward
CNT30122105Zea maysPhyscomitrium patens10.5422.0386.8476forward
CNT30290038Zea maysTriticum aestivum36.7532.3290.19265forward
CNT30221247Zea maysHordeum vulgare15.9521.5891.3115forward
CNT30658229Zea maysTriticum dicoccoides45.9130.0490.63331forward
CNT30477612Zea maysArabidopsis halleri30.3743.9879.91219forward
CNT30621504Zea maysCajanus cajan30.2413.8379.82218forward
CNT30557822Zea maysPanicum hallii36.7537.9796.23265forward

Expression of CNT3010265

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MTSPVSGLLLVTLSVMLPVDEAAFLMSRGSWARGRARRSCPACRWRRAA*

>peptide 2 (30 aa)
TINLWCQTATLRVCTRESTGVHKKERRNPN*

>peptide 3 (70 aa)
MSLVFWNSGGAFLAMPSALTVKDVGSRHSFFIWYLPGLNGNESTPPSMVGHWFAVPVPFTSRYVLLWISS*

Sequence

>CNT3010265
TAACAATTAATCTCTGGTGTCAAACAGCCACTCTTCGTGTTTGCACACGGGAGTCCACTGGAGTACACAAGAAAGAAAGAAGAAACCCAAACTGAAATTA
AAAACCAACAGCCCGAATTTGCATTAATAGTTACATACACGATTCCTCCTCCTCTCTCAAAAGTTCTCCATGACGGTCCGACGCCTCTAACAGTTAAAAC
GAATCACTCGAGCTGCGCGTACCAGACCCCCTGGATCTTGACATCCTTGGGCGCCTTAGCCCCGAGGTCGGTGTCCGACGGCTGCACGCTCTCGAATACG
CCAATGACCTCGCCGGTGTCCGGGTTGCTCTTGGTGACGCTCAGCGTGATGTTGCCCGTGGACGAGGCGGCGTTCTTGATGAGCCGCGGTAGCTGGGCAC
GAGGAAGGGCCCGCCGAAGCTGTCCGGCTTGCCGGTGGCGACGAGCTGCTTGACGGTGAGGCGGGTCATGAGCTTGGTCTTCTGGAACTCGGGCGGCGCG
TTCTTGGCGATGCCCTCCGCCTTGACGGTGAAGGACGTCGGCTCCAGGCACAGCTTCTTCATCTGGTACTTGCCGGGCTTGAACGGGAACGAGTCCACGC
CGCCGTCGATGGTCGGGCACTGGTTCGCCGTGCCCGTGCCCTTCACCTCCAGGTACGTCTTGCTCTGGATCTCGTCGTAGGTCAGCCTCTTGGGCGTGCC
CTCCGCGCTCGCGCCCTGCGC