« Back to Cajanus cajan search


Detailed information on CNT30621504


BLAST search results

BLAST vs Swiss-Prot:
sp|P84989|PSBO_POPEU, E-value = 8e-14

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675223Cajanus cajanSetaria viridis15.5584.7879.59245forward
CNT30535866Cajanus cajanEucalyptus grandis8.5736.1985.93135forward
CNT30317789Cajanus cajanCorylus avellana12.8299.5182.67202forward
CNT30546481Cajanus cajanIpomoea triloba11.6831.6780.98184forward
CNT30515361Cajanus cajanJuglans regia8.6330.7788.97136forward
CNT30700663Cajanus cajanQuercus lobata9.6428.6885.53152forward
CNT30266710Cajanus cajanChenopodium quinoa12.7523.5182.09201forward
CNT30727931Cajanus cajanCorchorus capsularis16.0532.6583.4253forward
CNT30379731Cajanus cajanManihot esculenta14.3420.3682.3226forward
CNT30710612Cajanus cajanGlycine max16.2424.8187.89256forward
CNT3042430Cajanus cajanPrunus dulcis16.1223.3282.68254forward
CNT30290508Cajanus cajanTriticum aestivum10.7922.1982.35170forward
CNT30221247Cajanus cajanHordeum vulgare6.7920.0884.11107forward
CNT30385696Cajanus cajanTriticum turgidum9.0735.3182.52143forward
CNT3086112Cajanus cajanVigna radiata11.2928.991.01178forward
CNT30508746Cajanus cajanSolanum lycopersicum14.2827.1778.67225forward
CNT30147296Cajanus cajanMedicago truncatula12.1233.4584.29191forward
CNT30436215Cajanus cajanAegilops tauschii10.7929.7782.35170forward
CNT30244672Cajanus cajanAvena sativa10.7922.8881.18170forward
CNT30658659Cajanus cajanTriticum dicoccoides10.7920.4182.35170forward
CNT30597992Cajanus cajanFraxinus excelsior5.3924.3684.7185forward
CNT3010265Cajanus cajanZea mays13.8330.2479.82218forward
CNT30607994Cajanus cajanGossypium raimondii15.3627.8884.71242forward
CNT30713316Cajanus cajanMalus domestica golden12.3720.9283.08195forward
CNT30626592Cajanus cajanDaucus carota15.2927.3679.25241forward
CNT30681576Cajanus cajanTriticum urartu6.7923.4683.18107forward
CNT30342712Cajanus cajanEragrostis tef14.426.0980.18227forward
CNT30571041Cajanus cajanVitis vinifera5.7725.0783.5291forward
CNT30704492Cajanus cajanPrunus avium13.2622.2682.3209forward
CNT3023343Cajanus cajanPopulus trichocarpa16.5635.1882.38261forward
CNT30319471Cajanus cajanAsparagus officinalis5.4628.8683.7286forward
CNT3036059Cajanus cajanCucumis melo13.2634.1585.17209forward
CNT30583886Cajanus cajanEchinochloa crusgalli13.8324.3880.28218forward
CNT30557822Cajanus cajanPanicum hallii13.8331.2380.73218forward
CNT30724033Cajanus cajanLupinus angustifolius15.4821.7384.84244forward

Expression of CNT30621504

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MPIEINSYSQIYVKNSYYLLGLTQSCARLIKYMIWCVLISIS*

>peptide 2 (47 aa)
MSPLHHLWLGTGLLFLFPSLPSRSCSGFRRRLVALEHLQHLPPEQCQ*

>peptide 3 (62 aa)
MSFVFWNSSGAFLVTPSAFTVNEVGSRQSFLASYFPALKANESTPPSMVGHWFAVPVPFTSK*

Sequence

>CNT30621504
ACCCCACGAATTCAAACTTTGAAATTTTAGGCATGGTAATTGGAGGTAGATATAATATACAAACACGACAGTGCTCTCGGTGGTAGGAAAGTTGGGTGAT
AGGAGAGTTGCAACAAAATCTGAACCAACAAAATAGAAAAGCAAAGCATAAAAGAAAGAGTCTATGACTCAAGCTGAGCATACCAGATGCCCTGGATCTT
GACATCTTTAGGAGCCTTAGCTCCTAAATCAGTGTCAGAAGGCTGAACACTCTCAAACACACCAATAACCTCACCAGTCTCAGGCTTGGTCTTGGTGACA
CTCAAGCGTGTCATGAGCTTTGTGTTTTGGAACTCTAGTGGGGCGTTCTTGGTCACTCCCTCGGCCTTCACTGTGAATGAAGTTGGCTCAAGGCAGAGCT
TCTTGGCCTCGTATTTCCCTGCCTTGAAGGCGAATGAGTCCACTCCACCATCTATGGTTGGGCACTGGTTTGCTGTTCCTGTTCCCTTCACTTCCAAGTA
GGTCTTGCTCTGGATTTCGTCGTAGGTTAGTCGCTTTGGAACACCTTCAGCACCTGCCCCCTGAACAATGCCAATAGAGATCAACAGTTATAGTCAAATA
TATGTTAAGAACAGTTACTACTTACTAGGACTTACACAATCATGTGCTAGACTCATTAAATATATGATTTGGTGTGTTCTAATAAGTATAAGCTAATAAC
AAAGCGTATTACAAAAAAGAACTTCGTATTACTAAGCCTTCCCAGCAATAGAAATTACAATCATCAAACTTAGATGCAATACTATAGATACCGTTGATGT
CGTTTTTCACTCAAATTTAAAGTTTTATTTTGGTAATATGTGTCCATATTTGATTATGAATGGATGTATTAGGTTAGTCAAACAAACTAGTCTTCAAAAT
TTGTGACATGAAAACTGATTTGACCACAGAATGCATGTCTTTTAAGGACGAATTTGACTACTTATACTGCATAATGAACTGAGCATGGCATTAGTAAACC
CGTCTCGTCAACTACAGCTAATTATTTGCAAGGCTGAGTCTTAAGCTTGACACTCGCAGTGACTTCGTAGCACAAATTGATACCTCATTCAAGTTGTGTG
AAGATATGTGGTTAAGACTGAAGACCACAAGTTTGGTTGGGATCATAAAGCTCTAATGTTGAATATCTCATGACAATTAAATTACTGATGTTAGACTGTT
AGAATCATTTGATTATCCCAATGTAACATTTATCATTGACCTCCCTAATCATATTGACGGTTACTACTCATAAACCAGAAGATCATTCATCAAACGAATC
CTATTGCATAACGAAAGAGAAAGATGAACACAAAATTTGACAGCAAAGTTGAAGGGACACGGGTGCTCTTAGTAATTAACAGAAGATACCCAATTGTTCA
ATGAAATATGAATGATAGTAAATTGCGTGGGAATGCACACAGTCAATGATAGATTATAGTATCAATTTATCAAATTAGAACAAGGAAGTCTAACTCAGTT
GGTGAAGTTTGTGTGTGAATTGTTATAAATTATGGTACCATGCTTGATTTCATGGATAAAAAAAGAAGATAGTATG