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lncRNA id
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Found 2749 records

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Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Additional notes
CNT30520431 Setaria italica II:35152113-35152936 (-) noncoding (-0.0774144)- 80 0.64 2Conserved counterparts: CNT30449622, CNT30577739, CNT30103477, CNT3013389
Expressed preferentially in root
CNT30520430 Setaria italica II:3814988-3815264 (+) noncoding (-0.0004096)- 45 0 1
CNT30520428 Setaria italica II:46406434-46407635 (-) noncoding (-0.0208896)- 57 17.9 2
CNT30520425 Setaria italica II:47702525-47704551 (+) noncoding (-0.016384)1e-23 (sp|Q0JA29|FLS2_ORYSJ) 88 5.54 3Expressed preferentially in leaf
CNT30520422 Setaria italica II:47527191-47527882 (+) coding (0.548)- 60 2.72 2Conserved counterparts: CNT30453634
CNT30520420 Setaria italica II:43970890-43972779 (-) coding (0.145)- 92 2.96 2Expressed preferentially in leaf
CNT30520417 Setaria italica II:1511014-1511571 (+) noncoding (-0.0512)- 54 162.71 2Expressed preferentially in stem
CNT30520416 Setaria italica II:31356061-31364653 (+) noncoding (-0.012288)- 51 6.96 3Conserved counterparts: CNT30696260
CNT30520415 Setaria italica II:4195567-4221122 (-) noncoding (-0.0004096)2e-38 (sp|O48851|RLP22_ARATH) 66 0.34 2
CNT30520414 Setaria italica II:44769474-44770512 (+) noncoding (-0.0684032)- 55 8.13 2
CNT30520413 Setaria italica II:14415501-14416976 (-) coding (0.207)0.000000001 (sp|Q10PI6|LCAT1_ORYSJ) 36 0.84 2
CNT30520412 Setaria italica II:35152103-35152779 (-) coding (0.27)2e-55 (sp|Q00327|PSAG_HORVU) 71 0.65 3Conserved counterparts: CNT30449622, CNT30577680, CNT30103477
Expressed preferentially in root
CNT30520411 Setaria italica II:35152120-35152730 (-) coding (0.201)6e-55 (sp|Q00327|PSAG_HORVU) 99 0 3Conserved counterparts: CNT30449622, CNT30577680, CNT30103477
Expressed preferentially in root
CNT30520409 Setaria italica II:36167700-36172381 (+) coding (0.088)- 90 11.94 3Expressed preferentially in leaf
CNT30520408 Setaria italica II:38500302-38500805 (+) noncoding (-0.100762)9e-20 (sp|P42815|RNS3_ARATH) 57 16.66 2Conserved counterparts: CNT30103485
Expressed preferentially in root
CNT30520407 Setaria italica II:43195882-43197117 (+) coding (0.297)1e-20 (sp|P10707|CB2D_SOLLC) 62 1.8 3Conserved counterparts: CNT30229721, CNT30452520, CNT30577064, CNT30596639, CNT30604352, CNT30102749, CNT30695032, CNT30708097
Expressed preferentially in root
CNT30520406 Setaria italica II:45417956-45419926 (+) noncoding (-0.14336)- 69 1.62 2
CNT30520404 Setaria italica II:41488696-41489521 (+) coding (0.219)- 72 0.19 3Conserved counterparts: CNT3013766
CNT30520401 Setaria italica II:10244343-10248305 (+) coding (0.434)- 78 5.98 2Conserved counterparts: CNT30697277
Expressed preferentially in root
CNT30520399 Setaria italica II:25201036-25201424 (-) noncoding (-0.13312)- 80 7.08 3
CNT30520397 Setaria italica II:16809720-16810056 (-) coding (0.307)- 64 0.96 2Expressed preferentially in root
CNT30520395 Setaria italica II:43274986-43275677 (-) noncoding (-0.126976)1e-64 (sp|Q9S7M0|CB3_ARATH) 48 0.14 3Conserved counterparts: CNT30229007, CNT30453153, CNT30596879, CNT30116671, CNT30604338, CNT3013298, CNT30695953
Expressed preferentially in root
CNT30520391 Setaria italica II:13906201-13908732 (+) coding (0.362)4e-105 (sp|Q84RL7|PIP21_MAIZE) 87 7.33 2Conserved counterparts: CNT30139319, CNT3012516
Expressed preferentially in root
CNT30520389 Setaria italica II:45615453-45616296 (-) noncoding (-0.036864)- 32 72.27 1
CNT30520388 Setaria italica II:30138839-30148470 (+) noncoding (-0.04096)- 48 12.27 2
CNT30520387 Setaria italica II:28372023-28372782 (-) noncoding (-0.144589)- 61 19 2Conserved counterparts: CNT30117581, CNT30604553, CNT30103455, CNT3013315, CNT30696108
Expressed preferentially in leaf
CNT30520385 Setaria italica II:19938687-19946221 (+) noncoding (-0.016384)- 67 2.03 2
CNT30520382 Setaria italica II:27701175-27701456 (+) noncoding (-0.073728)- 52 0 1
CNT30520381 Setaria italica II:5661046-5661552 (-) coding (0.427)2e-16 (sp|Q67YC9|Y4141_ARATH) - 3.69 2Expressed preferentially in root
CNT30520379 Setaria italica II:21299403-21300915 (+) noncoding (-0.045056)- 57 43.48 1Expressed preferentially in root
CNT30520378 Setaria italica II:35152088-35152778 (-) coding (0.262)3e-22 (sp|Q00327|PSAG_HORVU) 93 1.41 2Conserved counterparts: CNT30449622, CNT30577739, CNT30103477
Expressed preferentially in root
CNT30520377 Setaria italica II:35152113-35152936 (-) noncoding (-0.0417792)8e-43 (sp|Q00327|PSAG_HORVU) 91 0.56 3Conserved counterparts: CNT30449622, CNT30577680, CNT3013389
Expressed preferentially in root
CNT30520375 Setaria italica II:5660982-5664230 (-) coding (0.309)6e-26 (sp|Q67YC9|Y4141_ARATH) - 0.67 2Expressed preferentially in root
CNT30520374 Setaria italica II:29093111-29094831 (+) coding (0.114)- 98 6.04 1
CNT30520371 Setaria italica II:9804717-9806046 (+) coding (0.059)- 79 0.9 2Expressed preferentially in root
CNT30520370 Setaria italica II:46660456-46661678 (+) noncoding (-0.0208896)- 47 6.79 1
CNT30520368 Setaria italica II:35299854-35307180 (+) noncoding (-0.249856)- 30 1245.75 3Expressed preferentially in leaf
CNT30520367 Setaria italica II:30534572-30535265 (+) noncoding (-0.0528384)- 96 4.47 1
CNT30520366 Setaria italica II:337714-339715 (-) noncoding (-0.0303104)- 83 9.27 3
CNT30520365 Setaria italica II:33095863-33098075 (+) coding (0.107)- 91 1.8 1
CNT30520364 Setaria italica II:25123986-25124238 (-) noncoding (-0.0004096)- 34 9.97 1
CNT30520361 Setaria italica II:13906280-13908736 (+) coding (0.209)- 87 7.31 2Conserved counterparts: CNT30139319, CNT3012516
Expressed preferentially in root
CNT30520356 Setaria italica II:5585776-5587004 (-) noncoding (-0.0090112)- 55 4.36 3
CNT30520355 Setaria italica II:3096877-3098511 (-) coding (0.25)- 86 0.43 3Expressed preferentially in root
CNT30520352 Setaria italica II:43195860-43197109 (+) coding (0.203)7e-53 (sp|Q9S7W1|CB4C_ARATH) 48 14.52 2Conserved counterparts: CNT30229721, CNT30452520, CNT30577064, CNT30596509, CNT30604335, CNT30102551, CNT30694831, CNT30708157
Expressed preferentially in root
CNT30520351 Setaria italica II:47815875-47816584 (+) noncoding (-0.0278528)1e-18 (sp|Q9MA63|Y3550_ARATH) 48 1.47 2Conserved counterparts: CNT30132065
Expressed preferentially in root
CNT30520347 Setaria italica II:21581014-21584217 (+) coding (0.175)- 95 3.21 2
CNT30520346 Setaria italica II:46305838-46306550 (-) coding (0.248)- 56 6.2 2
CNT30520345 Setaria italica II:32801888-32802373 (+) coding (0.413)1e-23 (sp|P31239|ACCO_PEA) 96 0.48 2Conserved counterparts: CNT30577782
CNT30520341 Setaria italica II:38500032-38502061 (+) noncoding (-0.049152)0.000002 (sp|P42815|RNS3_ARATH) 41 305.61 2Conserved counterparts: CNT30103485
Expressed preferentially in root