CNCI status: | # |
Max. peptide length: | # |
Is conserved: | # |
Organ specific: | # |
Max. expression: | # |
No. of exons: | # |
Order by: | lncRNA ID |
Record details | CANTATAdb ID | Species | Location | CNCI status (score) | Swiss-Prot best hit | Max. peptide length | Max. expression | No. of exons | Additional notes |
---|---|---|---|---|---|---|---|---|---|
CNT30520431 | Setaria italica | II:35152113-35152936 (-) | noncoding (-0.0774144) | - | 80 | 0.64 | 2 | Conserved counterparts: CNT30449622, CNT30577739, CNT30103477, CNT3013389 Expressed preferentially in root |
|
CNT30520430 | Setaria italica | II:3814988-3815264 (+) | noncoding (-0.0004096) | - | 45 | 0 | 1 | ||
CNT30520428 | Setaria italica | II:46406434-46407635 (-) | noncoding (-0.0208896) | - | 57 | 17.9 | 2 | ||
CNT30520425 | Setaria italica | II:47702525-47704551 (+) | noncoding (-0.016384) | 1e-23 (sp|Q0JA29|FLS2_ORYSJ) | 88 | 5.54 | 3 | Expressed preferentially in leaf | |
CNT30520422 | Setaria italica | II:47527191-47527882 (+) | coding (0.548) | - | 60 | 2.72 | 2 | Conserved counterparts: CNT30453634 | |
CNT30520420 | Setaria italica | II:43970890-43972779 (-) | coding (0.145) | - | 92 | 2.96 | 2 | Expressed preferentially in leaf | |
CNT30520417 | Setaria italica | II:1511014-1511571 (+) | noncoding (-0.0512) | - | 54 | 162.71 | 2 | Expressed preferentially in stem | |
CNT30520416 | Setaria italica | II:31356061-31364653 (+) | noncoding (-0.012288) | - | 51 | 6.96 | 3 | Conserved counterparts: CNT30696260 | |
CNT30520415 | Setaria italica | II:4195567-4221122 (-) | noncoding (-0.0004096) | 2e-38 (sp|O48851|RLP22_ARATH) | 66 | 0.34 | 2 | ||
CNT30520414 | Setaria italica | II:44769474-44770512 (+) | noncoding (-0.0684032) | - | 55 | 8.13 | 2 | ||
CNT30520413 | Setaria italica | II:14415501-14416976 (-) | coding (0.207) | 0.000000001 (sp|Q10PI6|LCAT1_ORYSJ) | 36 | 0.84 | 2 | ||
CNT30520412 | Setaria italica | II:35152103-35152779 (-) | coding (0.27) | 2e-55 (sp|Q00327|PSAG_HORVU) | 71 | 0.65 | 3 | Conserved counterparts: CNT30449622, CNT30577680, CNT30103477 Expressed preferentially in root |
|
CNT30520411 | Setaria italica | II:35152120-35152730 (-) | coding (0.201) | 6e-55 (sp|Q00327|PSAG_HORVU) | 99 | 0 | 3 | Conserved counterparts: CNT30449622, CNT30577680, CNT30103477 Expressed preferentially in root |
|
CNT30520409 | Setaria italica | II:36167700-36172381 (+) | coding (0.088) | - | 90 | 11.94 | 3 | Expressed preferentially in leaf | |
CNT30520408 | Setaria italica | II:38500302-38500805 (+) | noncoding (-0.100762) | 9e-20 (sp|P42815|RNS3_ARATH) | 57 | 16.66 | 2 | Conserved counterparts: CNT30103485 Expressed preferentially in root |
|
CNT30520407 | Setaria italica | II:43195882-43197117 (+) | coding (0.297) | 1e-20 (sp|P10707|CB2D_SOLLC) | 62 | 1.8 | 3 | Conserved counterparts: CNT30229721, CNT30452520, CNT30577064, CNT30596639, CNT30604352, CNT30102749, CNT30695032, CNT30708097 Expressed preferentially in root |
|
CNT30520406 | Setaria italica | II:45417956-45419926 (+) | noncoding (-0.14336) | - | 69 | 1.62 | 2 | ||
CNT30520404 | Setaria italica | II:41488696-41489521 (+) | coding (0.219) | - | 72 | 0.19 | 3 | Conserved counterparts: CNT3013766 | |
CNT30520401 | Setaria italica | II:10244343-10248305 (+) | coding (0.434) | - | 78 | 5.98 | 2 | Conserved counterparts: CNT30697277 Expressed preferentially in root |
|
CNT30520399 | Setaria italica | II:25201036-25201424 (-) | noncoding (-0.13312) | - | 80 | 7.08 | 3 | ||
CNT30520397 | Setaria italica | II:16809720-16810056 (-) | coding (0.307) | - | 64 | 0.96 | 2 | Expressed preferentially in root | |
CNT30520395 | Setaria italica | II:43274986-43275677 (-) | noncoding (-0.126976) | 1e-64 (sp|Q9S7M0|CB3_ARATH) | 48 | 0.14 | 3 | Conserved counterparts: CNT30229007, CNT30453153, CNT30596879, CNT30116671, CNT30604338, CNT3013298, CNT30695953 Expressed preferentially in root |
|
CNT30520391 | Setaria italica | II:13906201-13908732 (+) | coding (0.362) | 4e-105 (sp|Q84RL7|PIP21_MAIZE) | 87 | 7.33 | 2 | Conserved counterparts: CNT30139319, CNT3012516 Expressed preferentially in root |
|
CNT30520389 | Setaria italica | II:45615453-45616296 (-) | noncoding (-0.036864) | - | 32 | 72.27 | 1 | ||
CNT30520388 | Setaria italica | II:30138839-30148470 (+) | noncoding (-0.04096) | - | 48 | 12.27 | 2 | ||
CNT30520387 | Setaria italica | II:28372023-28372782 (-) | noncoding (-0.144589) | - | 61 | 19 | 2 | Conserved counterparts: CNT30117581, CNT30604553, CNT30103455, CNT3013315, CNT30696108 Expressed preferentially in leaf |
|
CNT30520385 | Setaria italica | II:19938687-19946221 (+) | noncoding (-0.016384) | - | 67 | 2.03 | 2 | ||
CNT30520382 | Setaria italica | II:27701175-27701456 (+) | noncoding (-0.073728) | - | 52 | 0 | 1 | ||
CNT30520381 | Setaria italica | II:5661046-5661552 (-) | coding (0.427) | 2e-16 (sp|Q67YC9|Y4141_ARATH) | - | 3.69 | 2 | Expressed preferentially in root | |
CNT30520379 | Setaria italica | II:21299403-21300915 (+) | noncoding (-0.045056) | - | 57 | 43.48 | 1 | Expressed preferentially in root | |
CNT30520378 | Setaria italica | II:35152088-35152778 (-) | coding (0.262) | 3e-22 (sp|Q00327|PSAG_HORVU) | 93 | 1.41 | 2 | Conserved counterparts: CNT30449622, CNT30577739, CNT30103477 Expressed preferentially in root |
|
CNT30520377 | Setaria italica | II:35152113-35152936 (-) | noncoding (-0.0417792) | 8e-43 (sp|Q00327|PSAG_HORVU) | 91 | 0.56 | 3 | Conserved counterparts: CNT30449622, CNT30577680, CNT3013389 Expressed preferentially in root |
|
CNT30520375 | Setaria italica | II:5660982-5664230 (-) | coding (0.309) | 6e-26 (sp|Q67YC9|Y4141_ARATH) | - | 0.67 | 2 | Expressed preferentially in root | |
CNT30520374 | Setaria italica | II:29093111-29094831 (+) | coding (0.114) | - | 98 | 6.04 | 1 | ||
CNT30520371 | Setaria italica | II:9804717-9806046 (+) | coding (0.059) | - | 79 | 0.9 | 2 | Expressed preferentially in root | |
CNT30520370 | Setaria italica | II:46660456-46661678 (+) | noncoding (-0.0208896) | - | 47 | 6.79 | 1 | ||
CNT30520368 | Setaria italica | II:35299854-35307180 (+) | noncoding (-0.249856) | - | 30 | 1245.75 | 3 | Expressed preferentially in leaf | |
CNT30520367 | Setaria italica | II:30534572-30535265 (+) | noncoding (-0.0528384) | - | 96 | 4.47 | 1 | ||
CNT30520366 | Setaria italica | II:337714-339715 (-) | noncoding (-0.0303104) | - | 83 | 9.27 | 3 | ||
CNT30520365 | Setaria italica | II:33095863-33098075 (+) | coding (0.107) | - | 91 | 1.8 | 1 | ||
CNT30520364 | Setaria italica | II:25123986-25124238 (-) | noncoding (-0.0004096) | - | 34 | 9.97 | 1 | ||
CNT30520361 | Setaria italica | II:13906280-13908736 (+) | coding (0.209) | - | 87 | 7.31 | 2 | Conserved counterparts: CNT30139319, CNT3012516 Expressed preferentially in root |
|
CNT30520356 | Setaria italica | II:5585776-5587004 (-) | noncoding (-0.0090112) | - | 55 | 4.36 | 3 | ||
CNT30520355 | Setaria italica | II:3096877-3098511 (-) | coding (0.25) | - | 86 | 0.43 | 3 | Expressed preferentially in root | |
CNT30520352 | Setaria italica | II:43195860-43197109 (+) | coding (0.203) | 7e-53 (sp|Q9S7W1|CB4C_ARATH) | 48 | 14.52 | 2 | Conserved counterparts: CNT30229721, CNT30452520, CNT30577064, CNT30596509, CNT30604335, CNT30102551, CNT30694831, CNT30708157 Expressed preferentially in root |
|
CNT30520351 | Setaria italica | II:47815875-47816584 (+) | noncoding (-0.0278528) | 1e-18 (sp|Q9MA63|Y3550_ARATH) | 48 | 1.47 | 2 | Conserved counterparts: CNT30132065 Expressed preferentially in root |
|
CNT30520347 | Setaria italica | II:21581014-21584217 (+) | coding (0.175) | - | 95 | 3.21 | 2 | ||
CNT30520346 | Setaria italica | II:46305838-46306550 (-) | coding (0.248) | - | 56 | 6.2 | 2 | ||
CNT30520345 | Setaria italica | II:32801888-32802373 (+) | coding (0.413) | 1e-23 (sp|P31239|ACCO_PEA) | 96 | 0.48 | 2 | Conserved counterparts: CNT30577782 | |
CNT30520341 | Setaria italica | II:38500032-38502061 (+) | noncoding (-0.049152) | 0.000002 (sp|P42815|RNS3_ARATH) | 41 | 305.61 | 2 | Conserved counterparts: CNT30103485 Expressed preferentially in root |