Detailed information on CNT30132065


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SW70|SRP_VITRI, E-value = 1e-33

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30520677Lolium perenneSetaria italica21.4728.7491.02167forward
CNT30386979Lolium perenneTriticum turgidum34.727.5889.26270forward
CNT30659942Lolium perenneTriticum dicoccoides34.733.1789.26270forward
CNT30680115Lolium perenneTriticum urartu46.0236.5785.47358forward
CNT30596560Lolium perenneOryza meridionalis26.8629.987.08209forward
CNT30102674Lolium perenneOryza rufipogon13.1143.9793.14102forward
CNT30577004Lolium perenneOryza barthii26.8635.1386.6209forward
CNT30117268Lolium perenneOryza nivara26.7430.0190.87208forward
CNT30556599Lolium perennePanicum hallii15.6824.492.62122forward

Expression of CNT30132065

Peptides detected in this lncRNA

>peptide 1 (44 aa)
PDCIGLRQRRRHGPTLYKKHARRIQCSAHKAELTVVVEHHHHHP*

Sequence

>CNT30132065
CCTGATTGCATTGGATTAAGACAGAGACGGCGACATGGACCAACTTTGTACAAAAAGCATGCAAGGAGAATACAATGCTCAGCACATAAAGCAGAGCTAA
CAGTAGTAGTAGAACATCACCATCATCATCCATGATCACATTATCTACGAGACTAAACCAGCGATACCACTACACACCTTGATGTTCCCCAGGATTCTTT
CAGTACGTAGCTTATTCAGTTGAGGCCACGAGCGATACAGTACAGACCTCGTTTATCAGGGCAGTGTAGGAGCACGGCGTTGCTACTAGATCAAGATCCA
TAGGCTTGGCCTCCGGCGCGGGCTACTCGGCAGTCTCGGTTACTTCCACAGGCTTGGCCTCCGGCGGCGACCCCTCCCCGAACACCTTGGCGATGCGCTC
GACGGGGACGGCCGGGAGGTACCGGGCTCCGGGGAGCCCGTGCCCAGCCGCGTAGACGATCACCCTGTTGTACTTCTCGCACCAGTAGGCGGCGGTGGGC
ACGGCGATCTGCGCCACCTGCGGGAAGAGCGGCAGCCCGTTGAGCGCGCGCCAGGTGGAGACGGCGAGGTGCTCCGCCGCCGGCTCGTAGCGCACGTACA
GGTCCCTGGCCGCCGGCTCGATCCTCCCGTACGCGTCCTTGGCCACCGGCTCCACCTTCCCGTACACGGCGCGCGCCGCGCCGGTCACGCCCGACCGACG
CGCCTCGTCGACGATCTCCCTCGCCAGCTCCGGCGCCGCCTGGGCCGCCTCGTACGCTTTCGCTGACGCCGACTTGAG