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Detailed information on CNT30379782


BLAST search results

BLAST vs Swiss-Prot:
sp|P27522|CB13_SOLLC, E-value = 2e-94

BLAST vs NONCODE:
NONBRAT004778, E-value = 1e-19

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30372056Manihot esculentaArabidopsis thaliana69.0471.1779.18437forward
CNT30281438Manihot esculentaChenopodium quinoa24.4913.6785.16155forward
CNT30405509Manihot esculentaBeta vulgaris50.0813.1479.81317forward
CNT30526207Manihot esculentaPhaseolus vulgaris73.6240.4983.69466forward
CNT30631224Manihot esculentaVigna unguiculata70.4654.7281.61446forward
CNT30486017Manihot esculentaOlea europaea53.8734.4878.59341forward
CNT30711417Manihot esculentaGlycine max68.2524.1381.25432forward
CNT3045167Manihot esculentaPrunus dulcis30.9655.5284.18196forward
CNT3085597Manihot esculentaVigna radiata73.7833.8481.58467forward
CNT30543418Manihot esculentaBrassica napus73.7862.179.44467forward
CNT30238557Manihot esculentaBrassica oleracea70.4667.8878.7446forward
CNT30173586Manihot esculentaTrifolium pratense25.7517.0581.6163forward
CNT30145816Manihot esculentaMedicago truncatula73.7822.4481.37467forward
CNT30311401Manihot esculentaCamelina sativa47.2437.980.27299forward
CNT3059858Manihot esculentaArabidopsis lyrata51.9757.4278.72329forward
CNT3081731Manihot esculentaBrassica juncea71.8867.9178.9455forward
CNT30259451Manihot esculentaBrassica rapa56.8749.3880360forward
CNT30611481Manihot esculentaArabis alpina55.2942.9479.43350forward
CNT30597278Manihot esculentaFraxinus excelsior65.8882.7479.86417forward
CNT30608086Manihot esculentaGossypium raimondii34.4455.7581.19218forward
CNT30217954Manihot esculentaKalanchoe fedtschenkoi22.5939.7285.31143forward
CNT30649241Manihot esculentaRosa chinensis75.241.8378.15476forward
CNT30210187Manihot esculentaHelianthus annuus47.8737.0480.86303forward
CNT30718929Manihot esculentaMalus domestica golden25.9117.6781.71164forward
CNT30624860Manihot esculentaDaucus carota31.623.1780200forward
CNT30479074Manihot esculentaArabidopsis halleri40.9244.8980.31259forward
CNT30621314Manihot esculentaCajanus cajan51.9726.0983.28329forward
CNT30359331Manihot esculentaLactuca sativa34.9125.6478.73221forward
CNT30573352Manihot esculentaVitis vinifera74.8872.782.28474forward
CNT3027741Manihot esculentaTheobroma cacao23.5434.181.88149forward
CNT3055927Manihot esculentaAmborella trichopoda15.3222.483.5197forward
CNT30118713Manihot esculentaCitrus clementina69.5173.0983.41440forward
CNT3038106Manihot esculentaCucumis melo15.9620.3684.16101forward
CNT30329767Manihot esculentaDioscorea rotundata42.543.9580.67269forward
CNT30725700Manihot esculentaLupinus angustifolius54.8238.7781.27347forward

Expression of CNT30379782

Peptides detected in this lncRNA

>peptide 1 (61 aa)
RCFLILTCPLLQKITVGLFHTMVTLSRRDKKSKRKRKLHRLSLSPNRQELALMELELQFLH*

Sequence

>CNT30379782
GAGGTGTTTCTTGATCTTAACATGTCCTTTGTTACAGAAAATTACAGTAGGGCTTTTTCACACGATGGTTACATTGAGTAGGAGAGACAAGAAAAGCAAA
AGGAAAAGGAAACTGCATAGGCTGTCCCTATCCCCAAATAGACAAGAATTGGCTCTAATGGAACTTGAGCTTCAATTCCTTCATTGATTTCTCATCTTTA
CCAAACCCAAGAGGGTTGAACAGGGGTCCTCCAGGGTAGGCTGGGTCTCCAGATCCCCCCAAGTACTTTTCCAATCCCAAGAAATACTGCTTGCCCATGG
AGCCTGGGTTTGCCCAATCTTGAAATCTCCTGTGCTCCGCAAAACCCATGAGTGCCATTTCCAGCACAAACAGTGTGTATGGGTCCGCCCAGTAATCGTA
TGTACCAGCCGGTGGGATCACGCCGGTTTTGAACCAGGGGAGTGCTGTTTCGGCGGGGATGAGACCTGCCTTGCCTAGAATTTCTGGTGCAATGGCACCT
ACTGCCCCCAACATGGCATATCTTCCATTGATGACTTCACCGTAAGCTAACCATTTTGGCTCAATGAATCCTCCTGTACCTTCAGGGTCTGAAAGACCAA
GCGGATCAAATCCGTAGTCACCAGGAAGACTGC