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Detailed information on CNT30486017

BLAST search results

BLAST vs Swiss-Prot:
sp|P27522|CB13_SOLLC, E-value = 2e-108

BLAST vs NONCODE:
NONBNAT006830, E-value = 9e-19

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30281438	Olea europaea	Chenopodium quinoa	24.37	21.25	82.57	241	forward
CNT30379782	Olea europaea	Manihot esculenta	34.48	53.87	78.59	341	forward
CNT30405509	Olea europaea	Beta vulgaris	21.13	8.67	82.3	209	forward
CNT30526207	Olea europaea	Phaseolus vulgaris	45.8	39.36	79.69	453	forward
CNT30631224	Olea europaea	Vigna unguiculata	45.5	55.21	78.44	450	forward
CNT30711417	Olea europaea	Glycine max	55.11	30.45	80	545	forward
CNT3045175	Olea europaea	Prunus dulcis	20.83	44.98	83.98	206	forward
CNT3085597	Olea europaea	Vigna radiata	45.5	32.61	79.33	450	forward
CNT30543419	Olea europaea	Brassica napus	48.94	54.2	77.89	484	forward
CNT30233367	Olea europaea	Brassica oleracea	32.56	36.14	78.88	322	forward
CNT30145652	Olea europaea	Medicago truncatula	49.34	25.59	79.1	488	forward
CNT30311401	Olea europaea	Camelina sativa	19.51	24.46	79.79	193	forward
CNT3059858	Olea europaea	Arabidopsis lyrata	19.51	33.68	80.83	193	forward
CNT3082002	Olea europaea	Brassica juncea	33.67	45.68	78.38	333	forward
CNT30259051	Olea europaea	Brassica rapa	33.67	41.68	79.58	333	forward
CNT30611624	Olea europaea	Arabis alpina	48.94	47.97	78.31	484	forward
CNT30597278	Olea europaea	Fraxinus excelsior	40.34	79.17	91.73	399	forward
CNT30607765	Olea europaea	Gossypium raimondii	16.78	24.81	83.13	166	forward
CNT30217954	Olea europaea	Kalanchoe fedtschenkoi	10.11	27.78	83	100	forward
CNT30214152	Olea europaea	Helianthus annuus	29.12	65.31	80.9	288	forward
CNT30625164	Olea europaea	Daucus carota	55.11	47.06	80	545	forward
CNT30479074	Olea europaea	Arabidopsis halleri	28.72	49.22	78.17	284	forward
CNT30621314	Olea europaea	Cajanus cajan	27.81	21.81	79.64	275	forward
CNT30359023	Olea europaea	Lactuca sativa	39.64	74.38	81.89	392	forward
CNT30573352	Olea europaea	Vitis vinifera	26.39	40.03	80.46	261	forward
CNT3027741	Olea europaea	Theobroma cacao	17.29	39.13	80.12	171	forward
CNT3055927	Olea europaea	Amborella trichopoda	8.8	20.09	83.91	87	forward
CNT30118654	Olea europaea	Citrus clementina	32.25	59.29	82.13	319	forward
CNT3037927	Olea europaea	Cucumis melo	19.62	40.59	82.99	194	forward
CNT30329767	Olea europaea	Dioscorea rotundata	19.41	31.37	79.17	192	forward
CNT30725700	Olea europaea	Lupinus angustifolius	57.74	63.8	78.46	571	forward
CNT3040126	Olea europaea	Marchantia polymorpha	15.07	22.47	83.22	149	forward

Expression of CNT30486017

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MGGLFLLELGQPFQEFRVQLLLLHPPSRNAH*

>peptide 2 (33 aa)
QTNDINNILKARTIRSIIKVLTKFPSHEHISCL*

>peptide 3 (60 aa)
MQGHLTLPTISPNPKSIACPWTLDWPSPGISGALRIPQVPIRKRIGYRNRPSSCMFQLEE*

>peptide 4 (62 aa)
MVQQVLVGTNPSHQSLYKVTQDCQHSQSSILHFLHLQLLHGFLVFTEPQRVEKGATWVCRVT*

>peptide 5 (65 aa)
MDFSSLPNPNGLKRGPPGYAGSPDPPNHFSKPKKYCLPMDPGLAQSWNLRCSANPTSANSKTNRV*

Sequence

>CNT30486017
GGCAGACAAACGACATCAATAATATTCTTAAAGCACGTACAATACGAAGCATCATTAAAGTACTAACAAAGTTTCCAAGTCATGAACATATCTCGTGTTT
GTAGATTACATACATGGGAGATGCTGAACTATCTGCACACATATGTTACAATCTGAGAGAGAGACAACATACGACGACAATTTAGTGGAATTTGAGGCTG
GTTAAGACATTGTTGTTCACAGGATCAGCCAAATGGTCCAGCAGGTTTTGGTAGGGACCAACCCCAGTCACCAAAGCTTGTACAAAGTAACCCAGGATTG
CCAACATAGCCAATCTTCCATTCTTCACTTCCTTCACCTTCAACTCCTTCATGGATTTCTCGTCTTTACCGAACCCCAACGGGTTGAAAAGGGGGCCACC
TGGGTATGCAGGGTCACCTGACCCTCCCAACCATTTCTCCAAACCCAAAAAGTATTGCTTGCCCATGGACCCTGGATTGGCCCAGTCCTGGAATCTCCGG
TGCTCTGCGAATCCCACAAGTGCCAATTCGAAAACGAATAGGGTATAGGAATCGGCCCAGTAGTTGTATGTTCCAGCTGGAGGAATAACTCCGGTCTTGA
ACCATGGGAGGGCTGTTTCTGCTGGAATTAGGCCAGCCTTTCCAAGAATTTCGGGTGCAATTGCTCCTATTGCACCCACCATCGCGCAACGCCCATTGAA
AATTTCTCCATAGGCTAGCCATTTGGGTAGGAAAGACTCTGCTTGGAAGCAAACCAGAGAGGCCTGTCTGCTCCTTGCTGACAAAATAATCAATGGCAAT
AAGTAAAATTGAGCTTATAAGCATATGTGCAGTACAGTGAAAACGTGAAAGAGTCAAAGTGGATGCAACTCTCTTATGATGGATGAATCACTGTAGAATT
GTGGGCGCACTTGTTTTCGATCTCTATTTTGTTTATTATTTGCTCTCGTAAATAGCTAGAGATTAGAGTTTAGTCCATAACAGACTAAC