« Back to Cajanus cajan search


Detailed information on CNT30621314


BLAST search results

BLAST vs Swiss-Prot:
sp|P27522|CB13_SOLLC, E-value = 4e-108

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30372056Cajanus cajanArabidopsis thaliana28.1557.8281.41355forward
CNT30379782Cajanus cajanManihot esculenta26.0951.9783.28329forward
CNT30405509Cajanus cajanBeta vulgaris43.0622.5180.85543forward
CNT30526207Cajanus cajanPhaseolus vulgaris30.7733.7189.69388forward
CNT30631224Cajanus cajanVigna unguiculata26.9641.7288.82340forward
CNT30486017Cajanus cajanOlea europaea21.8127.8179.64275forward
CNT30711423Cajanus cajanGlycine max48.3761.6889.51610forward
CNT3045175Cajanus cajanPrunus dulcis7.7721.489.898forward
CNT3085597Cajanus cajanVigna radiata30.7728.1291.75388forward
CNT30540202Cajanus cajanBrassica napus25.1461.7982.33317forward
CNT30233607Cajanus cajanBrassica oleracea25.1440.2881.7317forward
CNT30173586Cajanus cajanTrifolium pratense19.2725.4286.01243forward
CNT30146039Cajanus cajanMedicago truncatula28.7147.6383.98362forward
CNT30311401Cajanus cajanCamelina sativa43.9370.2279.06554forward
CNT3059858Cajanus cajanArabidopsis lyrata42.8294.2479.81540forward
CNT3082028Cajanus cajanBrassica juncea42.8270.2280.56540forward
CNT30259100Cajanus cajanBrassica rapa25.1442.6682.02317forward
CNT30611481Cajanus cajanArabis alpina27.2842.2179.94344forward
CNT30597278Cajanus cajanFraxinus excelsior24.561.3181.55309forward
CNT30608086Cajanus cajanGossypium raimondii17.2155.585.25217forward
CNT30217954Cajanus cajanKalanchoe fedtschenkoi9.9134.7282.4125forward
CNT30649241Cajanus cajanRosa chinensis23.5526.179.46297forward
CNT30210187Cajanus cajanHelianthus annuus43.6267.2478.91550forward
CNT30625164Cajanus cajanDaucus carota28.0730.5779.38354forward
CNT30479074Cajanus cajanArabidopsis halleri43.5495.1579.6549forward
CNT30359331Cajanus cajanLactuca sativa16.4224.0181.16207forward
CNT30573352Cajanus cajanVitis vinifera27.3652.9182.32345forward
CNT3027741Cajanus cajanTheobroma cacao19.3555.8483.2244forward
CNT3055927Cajanus cajanAmborella trichopoda9.9128.8780.8125forward
CNT30118713Cajanus cajanCitrus clementina22.2846.6882.56281forward
CNT30725154Cajanus cajanLupinus angustifolius28.3159.584.31357forward
CNT3048728Cajanus cajanCucumis sativus14.9149.3479.26188forward

Expression of CNT30621314

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MGVLFPVGSDRLCQEFQVQWHQLHPTLRTDR*

>peptide 2 (37 aa)
MSNVSSCFTCQFLQSHSKEQKVDMMVQSSLKEQRGGY*

>peptide 3 (41 aa)
MAPTAPNIAYRPLMISPYASHFGSMNPPVPSGSESPRGSNP*

>peptide 4 (48 aa)
MSILTEPQQGTKGRHDGTVQSQRAERRILKDEEGSKEYVTTYNTFSGT*

>peptide 5 (50 aa)
MPIGTVTKFCTKTKGQNLNKVLCCCSVIKIEINSCNLVFMETLCSNLFKS*

Sequence

>CNT30621314
CTTTTATTTGTGAGAAGGCTCAAATAAAAGATTAAGGAGCAAAAAGAGAAGAAGATGTCGAATGTCTCTAGTTGTTTTACATGTCAATTCTTACAGAGCC
ACAGCAAGGAACAAAAGGTCGACATGATGGTACAGTCCAGTCTCAAAGAGCAGAGAGGAGGATATTGAAAGATGAGGAAGGGAGTAAAGAATATGTAACA
ACATATAATACATTCAGTGGAACTTGAGGCTGGTCAAGACGTTGTTGTGCACAGGGTCAGCCAGGTGATCTAGGAGGTTTTGGTATGGTCCTTCCCCTGT
CACGAGAGCCTGAACAAAGTAACCCAATATTGCCAACATAGCCAACCTTCCATTCTTCACTTCCTTCAGCTTCAAATCCTTCAAGGACTTCTCATCCTTG
CCAAAGCCAAGAGGTCCTAAGAAGTATTGTTTCCCCATAGAGCCAGGTTTGGCCCAGTCTTGGAACCTTCTGTGCTCTGCAAACCCCATTAGCGCCAACT
CAAACACAAAGAGTGTGTAGGAGTCTGCCCAGTAGTTGTATGTTCCTGCAGGTGGGATCACACCGGTTTTGAACCATGGGAGTGCTGTTTCCTGTGGGAT
CAGACCGGCTTTGCCAAGAATTTCAGGTGCAATGGCACCAACTGCACCCAACATTGCGTACCGACCGTTGATGATTTCACCATATGCTAGCCATTTTGGC
TCGATGAACCCTCCTGTTCCTTCAGGGTCTGAAAGTCCTAGAGGGTCAAATCCGTAGTCACCTGGTAGGCTGCAATGCAAATCATGACAAATAAAGTCAA
TGCCAACATACTGAAGTGCAGATAAACATGATGTATTGATGTAATATTAGGTAATTAGCCTCGTAACTTAGATACAGTATCCTTAGTCATCAAAATTGAA
ATTTCACTTTTGTAATGTGCTTTTATACTTGTTATAACCTTTAGTTTCACATATTATCAAAATTCTGATGTAAAAAAAAAAAAAACACCAACAATGCCTA
TCGGTACTGTAACTAAGTTTTGTACTAAAACAAAAGGACAAAACTTAAATAAAGTGTTATGTTGTTGTTCTGTGATTAAAATTGAAATCAATTCATGCAA
TTTAGTTTTCATGGAAACTCTTTGCTCTAACCTGTTCAAAAGTTGAGGTACATGGTTGATTTTAACTCAGCAAAAACTGAATTTATTTTACTTTCTTCTG
GTATAATATTTTTCTTTAGAGAAGTTTATCCTATATAATCAATTATGAAGAAAGTTACCTG