CANTATAdb - search

« Back to Kalanchoe fedtschenkoi search

Detailed information on CNT30217954

BLAST search results

BLAST vs Swiss-Prot:
sp|P27522|CB13_SOLLC, E-value = 4e-75

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30372056	Kalanchoe fedtschenkoi	Arabidopsis thaliana	22.22	13.03	85	80	forward
CNT30281438	Kalanchoe fedtschenkoi	Chenopodium quinoa	33.89	10.76	83.61	122	forward
CNT30379782	Kalanchoe fedtschenkoi	Manihot esculenta	39.72	22.59	85.31	143	forward
CNT30405509	Kalanchoe fedtschenkoi	Beta vulgaris	33.89	5.06	81.15	122	forward
CNT30526207	Kalanchoe fedtschenkoi	Phaseolus vulgaris	29.44	9.21	83.02	106	forward
CNT30631224	Kalanchoe fedtschenkoi	Vigna unguiculata	24.72	10.92	83.15	89	forward
CNT30486017	Kalanchoe fedtschenkoi	Olea europaea	27.78	10.11	83	100	forward
CNT30708359	Kalanchoe fedtschenkoi	Glycine max	35.56	14.88	82.81	128	forward
CNT3045167	Kalanchoe fedtschenkoi	Prunus dulcis	42.78	43.63	79.87	154	forward
CNT3085597	Kalanchoe fedtschenkoi	Vigna radiata	28.89	7.54	83.65	104	forward
CNT30543417	Kalanchoe fedtschenkoi	Brassica napus	32.22	16.89	81.03	116	forward
CNT30233182	Kalanchoe fedtschenkoi	Brassica oleracea	32.22	17.34	81.9	116	forward
CNT3060116	Kalanchoe fedtschenkoi	Arabidopsis lyrata	22.22	16.74	86.25	80	forward
CNT3073350	Kalanchoe fedtschenkoi	Brassica juncea	32.22	21.13	82.76	116	forward
CNT30259451	Kalanchoe fedtschenkoi	Brassica rapa	32.22	15.91	81.03	116	forward
CNT30611481	Kalanchoe fedtschenkoi	Arabis alpina	24.17	10.67	83.91	87	forward
CNT30597278	Kalanchoe fedtschenkoi	Fraxinus excelsior	33.89	24.21	82.79	122	forward
CNT30607765	Kalanchoe fedtschenkoi	Gossypium raimondii	30.56	16.44	84.55	110	forward
CNT30649241	Kalanchoe fedtschenkoi	Rosa chinensis	41.39	13.09	80.54	149	forward
CNT30210187	Kalanchoe fedtschenkoi	Helianthus annuus	26.39	11.61	83.16	95	forward
CNT30718929	Kalanchoe fedtschenkoi	Malus domestica golden	47.78	18.53	83.14	172	forward
CNT30625164	Kalanchoe fedtschenkoi	Daucus carota	25.28	7.86	86.81	91	forward
CNT30340471	Kalanchoe fedtschenkoi	Eragrostis tef	28.06	12.93	85.15	101	forward
CNT30479074	Kalanchoe fedtschenkoi	Arabidopsis halleri	28.61	17.85	82.52	103	forward
CNT30368762	Kalanchoe fedtschenkoi	Sorghum bicolor	23.89	17.03	84.88	86	forward
CNT30621314	Kalanchoe fedtschenkoi	Cajanus cajan	34.72	9.91	82.4	125	forward
CNT30359331	Kalanchoe fedtschenkoi	Lactuca sativa	34.72	14.5	83.2	125	forward
CNT30573352	Kalanchoe fedtschenkoi	Vitis vinifera	43.06	23.77	81.94	155	forward
CNT3027741	Kalanchoe fedtschenkoi	Theobroma cacao	28.89	23.8	82.69	104	forward
CNT3055927	Kalanchoe fedtschenkoi	Amborella trichopoda	39.17	32.56	84.4	141	forward
CNT30118713	Kalanchoe fedtschenkoi	Citrus clementina	44.17	26.41	83.65	159	forward
CNT30583519	Kalanchoe fedtschenkoi	Echinochloa crusgalli	24.72	34.77	84.27	89	forward
CNT30725730	Kalanchoe fedtschenkoi	Lupinus angustifolius	25.56	13.73	82.61	92	forward

Expression of CNT30217954

Peptides detected in this lncRNA

>peptide 1 (35 aa)
DRLILPSTSPNLGNIAFPWIRAWPSLGTSCAQRTP*

>peptide 2 (50 aa)
GSPDPPKYFSKPRKYCFPMDPGLAQSWNLLCSANPMRAISSTNRVNGSAQ*

Sequence

>CNT30217954
CGGATCGCCTGATCCTCCCAAGTACTTCTCCAAACCTAGGAAATATTGCTTTCCCATGGATCCGGGCTTGGCCCAGTCTTGGAACCTCCTGTGCTCAGCG
AACCCCATGAGAGCCATCTCCAGCACAAACAGGGTGAATGGGTCCGCCCAGTAGTTGTAGGTGCCGGCAGTTTCAGCCGGGATAAGTCCTAGCTTGCCCA
AGATTTCTGGTGCAATAGCACCTACAGCCCCAAGCATAGCGTAACGTCCATTGATGACCTCTCCGTAAGCCAGCCACTTGGGCTCGATGAACCCTCCAGT
ACCTTCAGGGTCCGATAGTCCCAACGGGTCAAATCCGTAATCACCAGGCAAGCTGTAAAG