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Detailed information on CNT30725700


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SY97|LHCA3_ARATH, E-value = 2e-97

BLAST vs NONCODE:
NONBRAT004778, E-value = 8e-59

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30372056Lupinus angustifoliusArabidopsis thaliana41.7960.9182.09374forward
CNT30281438Lupinus angustifoliusChenopodium quinoa35.7528.2281.25320forward
CNT30379782Lupinus angustifoliusManihot esculenta38.7754.8281.27347forward
CNT30405509Lupinus angustifoliusBeta vulgaris21.017.7987.23188forward
CNT30526207Lupinus angustifoliusPhaseolus vulgaris49.8338.7586.77446forward
CNT30631224Lupinus angustifoliusVigna unguiculata50.3955.3484.48451forward
CNT30486017Lupinus angustifoliusOlea europaea63.857.7478.46571forward
CNT30711417Lupinus angustifoliusGlycine max603086.41537forward
CNT3085597Lupinus angustifoliusVigna radiata50.3932.6885.37451forward
CNT30543419Lupinus angustifoliusBrassica napus56.0956.2281.27502forward
CNT30238548Lupinus angustifoliusBrassica oleracea42.7945.4381.98383forward
CNT30173588Lupinus angustifoliusTrifolium pratense24.3621.8287.61218forward
CNT30145652Lupinus angustifoliusMedicago truncatula63.0229.5884.22564forward
CNT3081731Lupinus angustifoliusBrassica juncea38.4451.3482.85344forward
CNT30264666Lupinus angustifoliusBrassica rapa42.7943.4281.46383forward
CNT30611624Lupinus angustifoliusArabis alpina58.7752.1380.61526forward
CNT30359247Lupinus angustifoliusLactuca sativa56.0959.6278.49502forward
CNT3037927Lupinus angustifoliusCucumis melo24.2545.483.87217forward
CNT30329767Lupinus angustifoliusDioscorea rotundata37.2154.4178.98333forward

Expression of CNT30725700

Peptides detected in this lncRNA

>peptide 1 (85 aa)
MELETGQDIIVDRVSQMIKKVLVWPNSCHRTLNKITQNCQHSQPPILNFLQLQVLQGLLILTKTKGVEERSSRISRVTRTYETFL*

>peptide 2 (33 aa)
MQTTRVYLLLAEHQKKEKALSIYAIDQKTQFPF*

Sequence

>CNT30725700
AAAATGCCAAATATGATTAGGGTGGGTATACCAATATTTCCAGTTCATTAATTAACATGTTATTAATTTCTTAAAATGCTACACCAAAGAGTAATAAAAT
GTCCACATGATGATGCTTTAGTCTCAAGAGTCAATAGAGAGATACAAAAGGAGGGAGGTTGAACTTTGCAAACAACAACCAAGAGAGGAAAGAGTAAGTG
ACATATATAATACATTACTCAATGGAACTTGAGACTGGTCAAGACATTATTGTTGACAGGGTCAGCCAGATGATCAAGAAGGTTTTGGTATGGCCCAACT
CCTGTCACAGGACCTTGAATAAAATAACCCAAAATTGCCAACATAGCCAACCTCCCATTCTTAACTTCCTTCAGCTTCAAGTCCTTCAAGGACTTCTCAT
CCTTACCAAAACCAAGGGGGTTGAAGAAAGGTCCTCCAGGATAAGCAGGGTTACCAGAACCTACGAAACCTTTCTCTAATCCCAAAAAGTACTGTTTACC
CATAGAGCCAGGGTTGTACCAATCTTGAAATCTCCTGTGCTCCGCGAATCCCATGAGTGCCAGCTCAAACACAAAGAGTGTGTAAGGGTCTGCCCAGTAG
TCGTATGTTCCGGCCGGTGGGAACACACCAGTTTTGAACCATGGTAGTGCTGTTTCCTCAGGAATCAGACCAGCCTTGCCAAGGATCTCAGGTGCTATAG
CACCGACTGCACCCAACATTGCGTAACGGCCGTTGATAACCTCACCATATGCTAGCCATCTTGGTAAGAAAGACTCTGCTTTGATGCAAACCACAAGGGT
CTATTTGCTTCTTGCTGAACACCAAAAGAAAGAGAAAGCGCTTTCAATATATGCAATAGATCAAAAAACACAATTCCCGTTTTGATATATATATA