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Detailed information on CNT30631224


BLAST search results

BLAST vs Swiss-Prot:
sp|P27522|CB13_SOLLC, E-value = 6e-83

BLAST vs NONCODE:
NONBRAT004778, E-value = 8e-28

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30372056Vigna unguiculataArabidopsis thaliana52.5269.7178.97428forward
CNT30281438Vigna unguiculataChenopodium quinoa39.6328.4883.28323forward
CNT30379782Vigna unguiculataManihot esculenta54.7270.4681.61446forward
CNT30405509Vigna unguiculataBeta vulgaris38.5313.0279.94314forward
CNT30526207Vigna unguiculataPhaseolus vulgaris85.8960.8290.71700forward
CNT30486017Vigna unguiculataOlea europaea55.2145.578.44450forward
CNT30711417Vigna unguiculataGlycine max61.3527.9391.4500forward
CNT3045175Vigna unguiculataPrunus dulcis20.9837.3483.04171forward
CNT3085597Vigna unguiculataVigna radiata94.7255.9493.26772forward
CNT30543419Vigna unguiculataBrassica napus55.0950.2880.18449forward
CNT30233367Vigna unguiculataBrassica oleracea32.2729.5280.99263forward
CNT30145845Vigna unguiculataMedicago truncatula62.4590.7383.3509forward
CNT3081731Vigna unguiculataBrassica juncea50.0660.980.39408forward
CNT30611624Vigna unguiculataArabis alpina62.0950.1578.46506forward
CNT30597278Vigna unguiculataFraxinus excelsior52.1584.3379.29425forward
CNT30608086Vigna unguiculataGossypium raimondii26.9956.2784.09220forward
CNT30217954Vigna unguiculataKalanchoe fedtschenkoi10.9224.7283.1589forward
CNT30210187Vigna unguiculataHelianthus annuus37.1837.0480.2303forward
CNT30625164Vigna unguiculataDaucus carota6042.2378.32489forward
CNT30621314Vigna unguiculataCajanus cajan41.7226.9688.82340forward
CNT30359130Vigna unguiculataLactuca sativa37.0659.5780.46302forward
CNT30422640Vigna unguiculataPapaver somniferum15.9531.7882.31130forward
CNT30573352Vigna unguiculataVitis vinifera52.5265.6481.54428forward
CNT30118713Vigna unguiculataCitrus clementina53.9973.0979.77440forward
CNT3037927Vigna unguiculataCucumis melo16.6928.4581.62136forward
CNT30329767Vigna unguiculataDioscorea rotundata37.0649.3579.8302forward
CNT30725700Vigna unguiculataLupinus angustifolius55.3450.3984.48451forward

Expression of CNT30631224

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MAVLSPQGSDQPCPEFQVLWHQLRPTLQNDH*

>peptide 2 (39 aa)
MSFLRSGTPRNKMSMMKIMMMMIQYQRAKRGYRKVIEFW*

>peptide 3 (55 aa)
MAPTAPNIAKRPLMISPYASHFGSMNPPVPSGSESPRGSNPYKKDFALMQTIKVCP

Sequence

>CNT30631224
TGTTTGTAATTGTTTTACATGTCATTTCTTAGAAGTGGCACACCAAGGAACAAAATGTCCATGATGAAGATCATGATGATGATGATACAGTACCAAAGAG
CAAAGAGAGGATATAGAAAAGTGATTGAGTTTTGGTAACTGCGTACAACAACAACACCAACAACCGAGACAGTAAAGAATATGTAACAACATATGATACA
TCAGTGGAACTTGAGACTGGTCAAGATGTTGTTGTGCACAGGGTCAGCAAGATGATCTAGGAGCTTGAATAAAGTAACCCAAGATCGCCAACATAGCCAA
CCTTCCATTCTTCACCTCCTTCAGCTTCAAATCCTTCAACGATTTCTCATCCTTGCCGAAACCAAGAGGGTTGAACAAAGGTCCTCCGGGGTATGCTGGT
TCACCAGAACCTCCGAGACCTTTTTCTAGTCCTAAGAAGTACTGCTTCCCCATAGACCCTGGTTTCGCCCAGTCTTGGAATCTTCTGTGTTCTGCAAAAC
CCATCAGTGCCATCTCCAACACGAACAGCGTGTACGAGTCTGCCCAGTAGTTGTATGTTCCTGCGGGTGGGAACACACCGGTTCTGAACCATGGCAGTGC
TGTCTCCTCAGGGATCAGACCAGCCTTGCCCAGAATTTCAGGTGCTATGGCACCAACTGCGCCCAACATTGCAAAACGACCATTGATGATCTCACCATAC
GCTAGCCATTTCGGCTCGATGAACCCCCCTGTTCCTTCAGGGTCTGAAAGCCCAAGAGGGTCAAATCCATATAAGAAAGACTTTGCTTTGATGCAAACCA
TAAAGGTCTGTCCGC