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Detailed information on CNT30213985


BLAST search results

BLAST vs Swiss-Prot:
sp|Q07473|CB4A_ARATH, E-value = 4e-86

BLAST vs NONCODE:
NONMTRT001132, E-value = 5e-19

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30513329Helianthus annuusJuglans regia31.6426.1783.33168forward
CNT30500595Helianthus annuusCoffea canephora21.2814.8582.3113forward
CNT30282946Helianthus annuusChenopodium quinoa56.3129.479.93299forward
CNT30382112Helianthus annuusManihot esculenta42.7543.0783.26227forward
CNT30401900Helianthus annuusBeta vulgaris54.9929.8679.45292forward
CNT30526506Helianthus annuusPhaseolus vulgaris57.0625.5781.52303forward
CNT30485914Helianthus annuusOlea europaea29.9419.8586.16159forward
CNT30502928Helianthus annuusNicotiana attenuata23.5435.4184125forward
CNT30708177Helianthus annuusGlycine max78.1539.4579.52415forward
CNT30562752Helianthus annuusActinidia chinensis41.6217.4784.16221forward
CNT30587569Helianthus annuusMusa acuminata15.2524.1886.4281forward
CNT30244332Helianthus annuusAvena sativa23.3515.2584.68124forward
CNT30261767Helianthus annuusBrassica rapa15.0729.968580forward
CNT30452520Helianthus annuusSaccharum spontaneum24.678.7481.68131forward
CNT30229721Helianthus annuusAnanas comosus23.545.3280.8125forward
CNT30219415Helianthus annuusKalanchoe fedtschenkoi21.4736.5484.21114forward
CNT3067780Helianthus annuusLeersia perrieri18.0820.0885.4296forward
CNT30338963Helianthus annuusEragrostis tef24.6719.7682.44131forward
CNT30620949Helianthus annuusCajanus cajan57.0628.1681.85303forward
CNT30357882Helianthus annuusLactuca sativa79.8560.3181.37424forward
CNT30370757Helianthus annuusOryza glumipatula18.0820.1384.3896forward
CNT30428948Helianthus annuusPapaver somniferum25.428.0283.7135forward
CNT30120689Helianthus annuusCitrus clementina25.2411.7884.33134forward
CNT3036109Helianthus annuusCucumis melo43.1322.0481.66229forward
CNT30580858Helianthus annuusEchinochloa crusgalli24.6722.1783.21131forward
CNT30604352Helianthus annuusOryza punctata24.6722.7482.44131forward
CNT30725306Helianthus annuusLupinus angustifolius21.0944.6283.04112forward

Expression of CNT30213985

Peptides detected in this lncRNA

>peptide 1 (78 aa)
MEVRSQHSPPPMNKLALPKPLQPKNLTVRLERSRLHIRTLEPGSDHITCNILRQVLVQRIQIKLQILRRFPQSEGVKPI

>peptide 2 (95 aa)
DGCVKWVAQMCNPVVEWTLSSGRCLDSKPEECHHGETGMLDLCQLEGCLLLRVAGQVQWIERTTWVQPLFGFKFSIPLKFDVPDHQNLDPDQSGD*

>peptide 3 (36 aa)
MDRTDHLGTTSFRVQVQHSFEIRCTRSPKPRSRSKW*

>peptide 4 (44 aa)
MARRACLISANWRVAFFSGSLAKFNGSNGPPGYNLFSGSSSAFL*

Sequence

>CNT30213985
AGGATGGTTGTGTGAAGTGGGTCGCTCAAATGTGTAACCCAGTTGTTGAGTGGACCCTTTCCAGTGGCCGCTGCCTGGACAGCAAACCCGAGGAATGCCA
CCATGGCGAGACGGGCATGCTTGATCTCTGCCAATTGGAGGGTTGCCTTCTTCTCAGGGTCGCTGGCCAAGTTCAATGGATCGAACGGACCACCTGGGTA
CAACCTCTTTTCGGGTTCAAGTTCAGCATTCCTTTGAAATTCGATGTACCCGATCACCAAAACCTCGATCCAGATCAAAGTGGTGATTGAAAATGGAAGT
GCGTAGCCAACATAGCCCACCGCCCATGAATAAGCTCGCACTCCCTAAACCTCTGCAACCCAAAAACCTCACTGTACGGCTGGAACGGAGTCGACTTCAC
ATCCGCACTCTCGAACCGGGTTCCGATCACATCACCTGCAACATTCTTCGCCAAGTTCTGGTCCAGCGAATCCAAATCAAACTGCAAATACTCCGCCGGT
TTCCCCAATCCGAAGGGGTCAAACCCATAGT