Detailed information on CNT30500595


BLAST search results

BLAST vs Swiss-Prot:
sp|Q07473|CB4A_ARATH, E-value = 6e-71

BLAST vs NONCODE:
NONMTRT001132, E-value = 9e-06

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30640440Coffea canephoraNymphaea colorata18.1320.6682.61138forward
CNT30513329Coffea canephoraJuglans regia22.626.7981.4172forward
CNT30374725Coffea canephoraArabidopsis thaliana12.0921.182.6192forward
CNT30276136Coffea canephoraChenopodium quinoa22.633.480.81172forward
CNT30382112Coffea canephoraManihot esculenta31.4145.3579.92239forward
CNT30526506Coffea canephoraPhaseolus vulgaris25.116.1282.72191forward
CNT30485914Coffea canephoraOlea europaea27.3325.9785.1208forward
CNT30708177Coffea canephoraGlycine max25.8918.7381.73197forward
CNT30562751Coffea canephoraActinidia chinensis17.6132.2181.34134forward
CNT30587569Coffea canephoraMusa acuminata11.9627.1684.6291forward
CNT30144899Coffea canephoraMedicago truncatula11.320.1484.8886forward
CNT30453511Coffea canephoraSaccharum spontaneum17.4825.2481.2133forward
CNT30229721Coffea canephoraAnanas comosus22.67.3380.81172forward
CNT30219415Coffea canephoraKalanchoe fedtschenkoi1843.9181.02137forward
CNT30213985Coffea canephoraHelianthus annuus14.8521.2882.3113forward
CNT30620949Coffea canephoraCajanus cajan26.2818.5982.5200forward
CNT30360807Coffea canephoraLactuca sativa14.5925.8182.88111forward
CNT3031825Coffea canephoraTheobroma cacao16.8225.5582.03128forward
CNT3023899Coffea canephoraPopulus trichocarpa19.5822.8984.56149forward
CNT30147796Coffea canephoraBrachypodium distachyon11.5622.1785.2388forward
CNT30725306Coffea canephoraLupinus angustifolius18.455.7882.86140forward
CNT3039307Coffea canephoraMarchantia polymorpha10.1223.1989.6177forward

Expression of CNT30500595

Peptides detected in this lncRNA

>peptide 1 (78 aa)
AGMLDLGKLKGSLLLRVSSQPERVKETSARVQPLFGVELGIPLELNVSNEQHLNPDQCAHGEWKWLAQVKVPFRHPAR*

>peptide 2 (58 aa)
MCSWRMEVVGPGKGTFPASCQVTPVSHSTAKAPRVANIAHLPWINSHSLNRCKPKTSL*

>peptide 3 (34 aa)
MMSPATFLAKFWSKESNSNCKYSAGLPSPKGSNP*

Sequence

>CNT30500595
GGCGGGCATGCTTGATCTCGGCAAGTTGAAGGGTAGCCTTCTTCTCAGGGTCAGCAGCCAACCCGAGCGGGTCAAAGAAACTTCCGCCAGGGTACAGCCT
CTTTTCGGGGTCGAGCTCGGCATTCCTTTGGAACTCAATGTATCCAATGAGCAGCACCTCAATCCAGATCAATGTGCTCATGGAGAATGGAAGTGGTTGG
CCCAGGTAAAGGTACCTTTCCGGCATCCTGCCAGGTAACTCCGGTGAGCCACTCGACAGCCAAGGCGCCAAGAGTAGCCAACATAGCCCACCTTCCGTGG
ATCAACTCACATTCTCTGAACCGCTGCAAGCCAAAGACTTCGTTGTAGGGCTGAAATGGAGTTGATTTCACGTCCGCGACTTCAGTCCTGGTTCCGATGA
TGTCACCGGCAACGTTTTTAGCCAAGTTCTGGTCCAAGGAGTCCAACTCAAATTGCAAGTACTCGGCCGGCTTGCCTAGTCCGAAGGGATCGAACCCATA
GTCACCCACGAGGCTGCCGTCCAGATAGTCTGGTGCGCTTTGCGATCTTTTTAGGAGCTTTCTTGGGTCCGAAACCAAACCTTGCCTGGACACGACCGGA
GCTGGAGTGGACCTCCGGAAGACGGGTTCCAAGGAAGGAGGATGTAGCGGCCGCTGTGGTGGTGGTGGCCATGTCGACGAATGTGAAGCTAGAGGATCTG
AGAGAGTAGGAGGCAGGGAGGAAGGCGTGTGGTGTGATATGGTGGTGTTTTTCACTTTTTC