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Detailed information on CNT30620949


BLAST search results

BLAST vs Swiss-Prot:
sp|P08222|CB22_CUCSA, E-value = 1e-19

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695032Cajanus cajanOryza sativa28.2546.1380.92304forward
CNT30520570Cajanus cajanSetaria italica31.6934.8780.06341forward
CNT30640553Cajanus cajanNymphaea colorata26.2135.0382.62282forward
CNT30513329Cajanus cajanJuglans regia27.5146.1186.15296forward
CNT30500595Cajanus cajanCoffea canephora18.5926.2882.5200forward
CNT30282946Cajanus cajanChenopodium quinoa29.1830.8882.48314forward
CNT30401900Cajanus cajanBeta vulgaris28.5331.3982.74307forward
CNT30526506Cajanus cajanPhaseolus vulgaris30.9528.193.99333forward
CNT30485914Cajanus cajanOlea europaea30.3940.8282.57327forward
CNT30708177Cajanus cajanGlycine max31.1331.8493.43335forward
CNT30289853Cajanus cajanTriticum aestivum27.738.1680.54298forward
CNT30562751Cajanus cajanActinidia chinensis18.6848.3282.59201forward
CNT30243799Cajanus cajanAvena sativa26.3944.3180.99284forward
CNT30659938Cajanus cajanTriticum dicoccoides20.5441.2381221forward
CNT30452520Cajanus cajanSaccharum spontaneum25.3718.2180.95273forward
CNT30229721Cajanus cajanAnanas comosus30.1113.882.72324forward
CNT30219415Cajanus cajanKalanchoe fedtschenkoi18.9665.3879.9204forward
CNT30213985Cajanus cajanHelianthus annuus28.1657.0681.85303forward
CNT30680618Cajanus cajanTriticum urartu27.731.0180.87298forward
CNT30360807Cajanus cajanLactuca sativa21.6554.1982.4233forward
CNT30577064Cajanus cajanOryza barthii2129.5879.65226forward
CNT30581346Cajanus cajanEchinochloa crusgalli22.9640.6980.97247forward
CNT30551395Cajanus cajanOryza brachyantha27.734.4181.88298forward
CNT30725365Cajanus cajanLupinus angustifolius34.1122.6584.2367forward
CNT3039307Cajanus cajanMarchantia polymorpha9.6731.3382.69104forward

Expression of CNT30620949

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MGQSSFHLGRASFLGQALRSSGTQCSQLPEPRSKSMW*

>peptide 2 (44 aa)
MGGPVVEWALAGGSSLDCEAQEAHHGKTCVLDLCQLQGGFLLWV*

>peptide 3 (62 aa)
MMVVWSGSLKWVAQLLSGPLPVAAAWTAKPRKPTMARRACLISANCRVAFFSGSEAKPNGSK*

>peptide 4 (44 aa)
MGAHLNIKQEHSAYSASPIHVTSLVSQALIIQLSENVYKPKPQV*

Sequence

>CNT30620949
CAGCATTAGATGCAAGAAACTTTTTGAATTTGGTTATTAAAACCATTGGTCACATACTATAGTTAATCAGCGTTTATGTAGTAGTAGAACCAAACTTAAT
GAATAAATTAAATTCTTGAAAGACCTCAACCCAATTTGCTGCCATTACCTTTCACAGTGGACTCAATATTTTACGAGTATTAATTTTTTATCCTCTCGAT
TTCGTGCTTAATTAACAATCATGGGAGCACACTTGAACATCAAGCAGGAGCATTCTGCTTACTCAGCCTCTCCAATTCACGTTACTAGTTTAGTTTCACA
AGCACTAATTATCCAGCTAAGTGAAAATGTTTACAAGCCAAAGCCACAAGTCTAAGAGGAGGATGAGAAGGTGTCAATGATGGTTGTGTGGAGTGGGTCA
CTCAAATGGGTGGCCCAGTTGTTGAGTGGGCCCTTGCCGGTGGCAGCAGCTTGGACTGCGAAGCCCAGGAAGCCCACCATGGCAAGACGTGCGTGCTTGA
TCTCTGCCAATTGCAGGGTGGCTTTCTTCTCTGGGTCTGAGGCCAAGCCCAATGGGTCAAAGTAGCTTCCACCTGGGTAGAGCCTCTTTTCTGGGTCAAG
CTCTGCGTTCCTCTGGAACTCAATGTAGCCAATTACCAGAACCTCGATCCAAATCAATGTGGTGATTGAGAATGGAAGTGGTTGCCCAAGGTATGATGAC
CCTTCCACTAGCTCCACCTTCAAATCAAAACGCAACTTCATAATTAATTAACAACCCCATCATCATATTATAATATATCAAAATAATTAAACAAAACGCT
ATTTCTTCATACCCAACTCTCAAAAATCTTATAGTCCTCTCGTGTTAGCCTTTCACGATTATTCCAAGTAATGAAAAAAGCACAAAATAACTATAACAAA
AGTCAATTACTTGATCATAATATTACTTGATCACTAAAAGTTACCATCCACGAACTTTCTAACATTTTACGTTGGAGAAACTGTTTCTTATTAATTGAAA
CCAAGTAATCTCATTCATGTTACTAGTTAGGCAGATCACATTCCTGGAGAAACTGTTTCTTATTAATTGAACCCAA