Detailed information on CNT30725306


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9XF88|CB4B_ARATH, E-value = 3e-40

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30500595Lupinus angustifoliusCoffea canephora55.7818.482.86140forward
CNT30282946Lupinus angustifoliusChenopodium quinoa52.1912.8881.68131forward
CNT30401900Lupinus angustifoliusBeta vulgaris50.612.9981.89127forward
CNT30213985Lupinus angustifoliusHelianthus annuus44.6221.0983.04112forward
CNT30120689Lupinus angustifoliusCitrus clementina44.229.7582.88111forward

Expression of CNT30725306

Peptides detected in this lncRNA

>peptide 1 (59 aa)
PIVKRAFATTIARRACLISANCNLAFFSGSVAKLRGSKKLPPGYNLFSGSSSAFLWNSM*

>peptide 2 (48 aa)
MFDFSQLQSSFLLRICGQVKRVKEASTWVQSLFWVKFSISLELNVTYY*

Sequence

>CNT30725306
GCCCAATTGTTAAGAGGGCCTTTGCCACAACCATTGCAAGACGTGCATGTTTGATTTCAGCCAATTGCAATCTAGCTTTCTTCTCAGGATCTGTGGCCAA
GTTAAGAGGGTCAAAGAAGCTTCCACCTGGGTACAATCTCTTTTCTGGGTCAAGTTCAGCATTTCTTTGGAACTCAATGTAACCTATTACTAGAGCTTCA
ATCCAAATCAATGAGGTGATTGAGAATGGAAGTGGTTGGCCAAGGTAGGAT