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Detailed information on CNT30526506


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9XF88|CB4B_ARATH, E-value = 5e-108

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695032Phaseolus vulgarisOryza sativa24.6444.3179.79292forward
CNT30671828Phaseolus vulgarisSetaria viridis9.6221.3590.35114forward
CNT30520570Phaseolus vulgarisSetaria italica23.2928.2278.99276forward
CNT30513329Phaseolus vulgarisJuglans regia24.9846.1184.46296forward
CNT30375654Phaseolus vulgarisArabidopsis thaliana12.3230.1780.82146forward
CNT30500595Phaseolus vulgarisCoffea canephora16.1225.182.72191forward
CNT30282946Phaseolus vulgarisChenopodium quinoa26.4130.7879.87313forward
CNT30401900Phaseolus vulgarisBeta vulgaris25.9131.3983.39307forward
CNT30485914Phaseolus vulgarisOlea europaea27.4340.5783.69325forward
CNT30502928Phaseolus vulgarisNicotiana attenuata13.3344.7686.08158forward
CNT30708177Phaseolus vulgarisGlycine max27.5130.9993.56326forward
CNT30289853Phaseolus vulgarisTriticum aestivum25.1538.1679.87298forward
CNT30221234Phaseolus vulgarisHordeum vulgare11.0521.8781.68131forward
CNT30587569Phaseolus vulgarisMusa acuminata9.7934.6386.21116forward
CNT30144767Phaseolus vulgarisMedicago truncatula11.6520.7583.33138forward
CNT30436081Phaseolus vulgarisAegilops tauschii16.0337.1880190forward
CNT30243799Phaseolus vulgarisAvena sativa24.2244.7779.79287forward
CNT30659570Phaseolus vulgarisTriticum dicoccoides9.4520.4483.93112forward
CNT30452520Phaseolus vulgarisSaccharum spontaneum23.2918.4179.71276forward
CNT30132399Phaseolus vulgarisLolium perenne6.3325.4285.3375forward
CNT30229721Phaseolus vulgarisAnanas comosus2713.6380.94320forward
CNT3067780Phaseolus vulgarisLeersia perrieri8.7821.7683.65104forward
CNT30213985Phaseolus vulgarisHelianthus annuus25.5757.0681.52303forward
CNT30680618Phaseolus vulgarisTriticum urartu25.1531.0180.54298forward
CNT30338963Phaseolus vulgarisEragrostis tef12.2421.8782.76145forward
CNT30620949Phaseolus vulgarisCajanus cajan28.130.9593.99333forward
CNT30360911Phaseolus vulgarisLactuca sativa14.3537.3682.94170forward
CNT30370757Phaseolus vulgarisOryza glumipatula12.2430.482.76145forward
CNT30120621Phaseolus vulgarisCitrus clementina10.1330.8584.17120forward
CNT30147796Phaseolus vulgarisBrachypodium distachyon6.9220.6586.5982forward
CNT30604352Phaseolus vulgarisOryza punctata13.0826.9183.87155forward
CNT30551395Phaseolus vulgarisOryza brachyantha25.4934.8781.13302forward
CNT30725365Phaseolus vulgarisLupinus angustifolius28.120.5684.08333forward
CNT3039307Phaseolus vulgarisMarchantia polymorpha8.6130.7282.35102forward

Expression of CNT30526506

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MMSPASFLARFWSSESSSNCKYSAGFPSPNGSNP*

>peptide 2 (40 aa)
MRFQEARPHEGGRGRCCCRCGGHELVLTCAVGGRELCLVE*

>peptide 3 (73 aa)
MAQRPWMSSHSRNLWSGLHVCNLGSGADDEPGLILSQVLVQRVQLKLQILRGLSEPKRVEPVVPDKAPVKPFW*

>peptide 4 (45 aa)
MMVVWSGSLKWVAQLLSGPLPVAAAWTAKPKKPTMARRACLISAN*

Sequence

>CNT30526506
TCTGAATTTTATCTGTATTTTTGGCTTAATTAAGATTCACAGGAGAAGAACAGTTTACGATGAAGCAGAAGAACTCTGCTAAGCCTCTCCAATAAAAGTT
ACCAGTTTGACAAGTACTAATTCAGCTAAGTGAAATGTTTGATTAATTACAACGCAAAGCCGAAAGACGTTTATAATATAGAGAGCAGGTACAAGAGTTG
TTTTTTCTTAAGAGGATGAGAAGGTGTCAATGATGGTTGTGTGGAGTGGGTCACTCAAGTGGGTAGCCCAGTTGTTGAGTGGGCCCTTGCCAGTGGCAGC
AGCTTGGACTGCAAAGCCCAAGAAGCCCACCATGGCAAGACGTGCGTGCTTGATCTCTGCCAATTGAAGAGTGGCTTTCTTCTCTGGGTCTGAGGCCAAA
CCAAGAGGGTCGAAGTAGCTGCCACCAGGGTACAACCTCTTTTCTGGGTCAAGCTCTGCGTTCCTCTGGAACTCAATGAACCCAATTACCAGAACCTCGA
TCCAGATCAATGTGGTGATTGAGAATGGAAGTGGTTGTCCAAGGATGTGAAGAATTTTCAAGCAAAGATCATCTAAAACTGCAATGGAAGGAAATGTTTG
ATTGATATCTGGAGAAGAAGCAAGGGCAGAGAAGCGTACCTTGCCGGCGTCCTGCCATGTGACACCGGTGAGCCACTCGACGGTGAGGGCTCCGAGGGTG
GCGAGCATGGCCCAGCGTCCGTGGATGAGCTCGCACTCGCGGAACCTCTGGAGTGGACTTCACGTCTGCAACCTCGGTTCTGGTGCCGATGATGAGCCCG
GCCTCATTCTTAGCCAGGTTCTGGTCCAGCGAGTCCAGCTCAAACTGCAAATACTCCGCGGGCTTTCCGAGCCCAAACGGGTCGAACCCGTAGTCCCCGA
TAAGGCTCCCGTCAAGCCATTCTGGTGACTTCGCGCCGGGGTACCACAACGGCCTCTCGGTGCCCGAGCCCTTCGACACCTTCTTGGGCGCGGCCTTCTT
CTTCGGCCCGAACCCGAATCGGGCCTGGACCCGCCCCGACCCAGAATGCGCTTCCAGGAGGCGCGTCCCCATGAAGGAGGACGTGGCCGCTGCTGTTGCC
GTTGCGGTGGCCATGAGTTGGTGCTAACTTGCGCTGTGGGGGGGAGAGAGTTGTGCTTGGTAGAGTAGTTAGTGGTTGGTGTGAG