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Detailed information on CNT30513329


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9XF88|CB4B_ARATH, E-value = 5e-61

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695032Juglans regiaOryza sativa43.1542.0380.87277forward
CNT30520570Juglans regiaSetaria italica38.6325.3681.05248forward
CNT30640430Juglans regiaNymphaea colorata1926.5885.25122forward
CNT30500595Juglans regiaCoffea canephora26.7922.681.4172forward
CNT30276136Juglans regiaChenopodium quinoa32.440.3983.17208forward
CNT3020107Juglans regiaCitrullus lanatus21.512.0686.23138forward
CNT30401900Juglans regiaBeta vulgaris43.1528.3280.51277forward
CNT30526506Juglans regiaPhaseolus vulgaris46.1124.9884.46296forward
CNT30485914Juglans regiaOlea europaea42.9934.4682.97276forward
CNT30502928Juglans regiaNicotiana attenuata19.1634.8482.11123forward
CNT30708177Juglans regiaGlycine max45.1727.5785.52290forward
CNT30289853Juglans regiaTriticum aestivum44.0836.2480.57283forward
CNT30221234Juglans regiaHordeum vulgare1920.3784.43122forward
CNT30562752Juglans regiaActinidia chinensis26.3213.3688.17169forward
CNT30587569Juglans regiaMusa acuminata18.0734.6387.07116forward
CNT30144899Juglans regiaMedicago truncatula18.2227.482.91117forward
CNT30436840Juglans regiaAegilops tauschii14.1722.4785.7191forward
CNT30243799Juglans regiaAvena sativa42.3742.4380.51272forward
CNT30659938Juglans regiaTriticum dicoccoides34.4241.2380.09221forward
CNT30452520Juglans regiaSaccharum spontaneum38.6316.5481.05248forward
CNT30229721Juglans regiaAnanas comosus43.1511.884.48277forward
CNT30213985Juglans regiaHelianthus annuus26.1731.6483.33168forward
CNT30680618Juglans regiaTriticum urartu44.0829.4580.21283forward
CNT30620949Juglans regiaCajanus cajan46.1127.5186.15296forward
CNT30360911Juglans regiaLactuca sativa22.1231.2185.21142forward
CNT30370757Juglans regiaOryza glumipatula1925.5885.25122forward
CNT30428948Juglans regiaPapaver somniferum20.097.6682.95129forward
CNT30328621Juglans regiaAsparagus officinalis13.7129.5387.588forward
CNT30120689Juglans regiaCitrus clementina24.1413.6289.03155forward
CNT3036109Juglans regiaCucumis melo21.9613.5786.52141forward
CNT30147934Juglans regiaBrachypodium distachyon1932.0284.43122forward
CNT30577064Juglans regiaOryza barthii34.2728.880.45220forward
CNT30581346Juglans regiaEchinochloa crusgalli38.0140.281.15244forward
CNT30604352Juglans regiaOryza punctata1921.1885.25122forward
CNT30551395Juglans regiaOryza brachyantha45.9534.0680.68295forward
CNT30725365Juglans regiaLupinus angustifolius21.968.784.4141forward
CNT3039307Juglans regiaMarchantia polymorpha14.3327.7182.6192forward

Expression of CNT30513329

Peptides detected in this lncRNA

>peptide 1 (66 aa)
MVVWRGSLKWVAQLLRGPFPVTAAWTAKPRKPTMARRACLISANWRVAFFSGSEAKPRGSKYFPPG*

>peptide 2 (51 aa)
MYPITRTSIHINVDDRWWALPISWAGFSYLRIQIGLGICRSWSKLLADVFQ*

>peptide 3 (48 aa)
MGCPVVERAFSGDGSLDGKAKEANHGEAGVLDFCQLEGGLLLWVGGQA*

>peptide 4 (41 aa)
ISNMLLSLVIVIHIFTRKVQTINQPSKMLVINQRNYREKGA*

Sequence

>CNT30513329
CAATTTCAAACATGCTGCTTAGCCTAGTAATTGTCATACATATTTTTACAAGGAAAGTACAGACTATAAATCAGCCAAGTAAAATGCTGGTGATAAACCA
AAGGAATTACAGAGAGAAAGGTGCTTGATTAAGAGGTGAAGGCGTCAATAATGGTGGTGTGGAGAGGGTCACTCAAATGGGTTGCCCAGTTGTTGAGAGG
GCCTTTTCCGGTGACGGCAGCTTGGACGGCAAAGCCAAGGAAGCCAACCATGGCGAGGCGGGCGTGCTTGATTTCTGCCAATTGGAGGGTGGCCTTCTTC
TCTGGGTCGGAGGCCAAGCCTAGAGGATCAAAGTACTTCCCGCCGGGGTAAAGCCTCTTCTCCGGGTCCAGCTCTGCGTTTCTTTGGAACTCGATGTATC
CAATTACCAGAACCTCAATCCATATCAACGTGGACGATCGGTGGTGGGCTTTACCGATTTCTTGGGCGGGCTTTTCTTACCTCCGAATCCAAATCGGGCT
TGGAATCTGCCGGAGTTGGAGTAAACTTCTGGCAGACGTGTTCCAATGAAGGAGGAAGTAGCAGCAGCAGTGGTTGCAGCCATGGCGATGGGGCTGAAGA
GTGGCAGGAGGTTCGAGAATGGGTGATTTTAATTGTTGAAAC