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Detailed information on CNT30219415


BLAST search results

BLAST vs Swiss-Prot:
sp|Q07473|CB4A_ARATH, E-value = 5e-42

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695194Kalanchoe fedtschenkoiOryza sativa74.0424.9780.95231forward
CNT30520570Kalanchoe fedtschenkoiSetaria italica66.6721.2778.37208forward
CNT30375654Kalanchoe fedtschenkoiArabidopsis thaliana47.1230.3780.27147forward
CNT30500595Kalanchoe fedtschenkoiCoffea canephora43.911881.02137forward
CNT30282946Kalanchoe fedtschenkoiChenopodium quinoa59.9418.3980.75187forward
CNT30401900Kalanchoe fedtschenkoiBeta vulgaris55.1317.5980.81172forward
CNT30526508Kalanchoe fedtschenkoiPhaseolus vulgaris77.2424.9279.67241forward
CNT30708177Kalanchoe fedtschenkoiGlycine max65.3819.3980.39204forward
CNT30289853Kalanchoe fedtschenkoiTriticum aestivum66.6726.6379.81208forward
CNT30221568Kalanchoe fedtschenkoiHordeum vulgare47.7614.2383.89149forward
CNT30386996Kalanchoe fedtschenkoiTriticum turgidum48.0827.7381.33150forward
CNT30562751Kalanchoe fedtschenkoiActinidia chinensis46.1534.6280.56144forward
CNT30436081Kalanchoe fedtschenkoiAegilops tauschii48.0829.3581.33150forward
CNT30243799Kalanchoe fedtschenkoiAvena sativa66.6732.4579.33208forward
CNT30659938Kalanchoe fedtschenkoiTriticum dicoccoides66.6738.8179.81208forward
CNT30453511Kalanchoe fedtschenkoiSaccharum spontaneum68.5940.6178.97214forward
CNT30229721Kalanchoe fedtschenkoiAnanas comosus48.46.4382.78151forward
CNT30213985Kalanchoe fedtschenkoiHelianthus annuus36.5421.4784.21114forward
CNT30680618Kalanchoe fedtschenkoiTriticum urartu66.6721.6480.29208forward
CNT30338974Kalanchoe fedtschenkoiEragrostis tef39.4227.0382.11123forward
CNT30620949Kalanchoe fedtschenkoiCajanus cajan65.3818.9679.9204forward
CNT30360911Kalanchoe fedtschenkoiLactuca sativa36.5425.0583.33114forward
CNT3036109Kalanchoe fedtschenkoiCucumis melo29.498.8582.6192forward
CNT30581456Kalanchoe fedtschenkoiEchinochloa crusgalli68.5937.2281.31214forward
CNT30604352Kalanchoe fedtschenkoiOryza punctata52.2428.380.37163forward
CNT30551395Kalanchoe fedtschenkoiOryza brachyantha66.6724.0281.73208forward
CNT3039307Kalanchoe fedtschenkoiMarchantia polymorpha46.1543.3779.86144forward

Expression of CNT30219415

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MASLACLISASCRVAFFSGSDANPNGSKNDPPGYNRFSGSSSAFLWNSMNP

Sequence

>CNT30219415
TTTACAAAACACCATTTTTCATTAACAAATCCAAGGCCATAAGACATATACATCTCAATTCTCAACTTAAGAGGAGGTGAAGGTATCAATGATGGTGTTG
TTGAGCGGACCCTTTCCGGTGGCCACAGCCTGAACCGCAAACCCCAAGAAAGCCACCATGGCCAGCCTGGCGTGCTTGATCTCAGCCAGCTGCAGGGTGG
CCTTCTTCTCCGGATCAGACGCCAATCCCAACGGGTCAAAGAATGATCCACCCGGGTACAATCGCTTCTCGGGGTCCAGCTCCGCATTCCTCTGGAACTC
GATGAATCCGAT